| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2397 |
|---|
| Symbol | |
|---|
| ID | 3580671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2819980 |
|---|
| End bp | 2820714 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290453 |
|---|
| Protein GI | 72162796 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCC GTGCGAGCAC CGTGCTCCCC GCCCGGCGGC GCCCCATCAC CCTGCACACC
GCGGACGGGC TGGCGCTCGT CGGCGAACTC GCCCTTCCCC AGGACAACGA CCCGGTAGCG
ACCATCATCT TCCTTCACCC CCTCCCCACC GCCGAGGGGA TGATGGACAG TCACGTGATC
CGCAAAGCGT CCTACCGGCT GCCCGCCCTC GCCGACATCG CGGTACTGCG GTTCAACACT
CGAGGCACCA CCTCCCGGCA CGGCACTAGT GAAGGAGAGT TCGGCGACGG GGAGGCCGAA
CGCTACGACG TTGCCGCGGC CATCGAATTC ACCGAGTTCG AAGACCTGCC CGAACCTTGG
CTGGTGGGCT GGTCGTTCGG CACCGAACTC GCCCTCAAAT GGGGGCACGA CCCCGCCGTG
CAAGGAGCGA TCCTGCTGTC CCCGCCCCTG CACCGCGCTA CCGACGCCGA CTTGGACGCC
TGGGCGGAGT TCGGCCGTCC CCTGGTCGCG CTTGTCCCGG AATACGACGA CTACCTGCGC
CCCGACGAGG CGCGTAAGCG CTTCGCCCGC GTGCCGCACG CCGAGGTGAT CGGCGTCCCC
AACGCCAGGC ACCTGTGGGT GGGGGAGCCG TACGTGCGCA TTGTGCTCAA CGAGATCGTC
AAACGGGTCG CCCCCCAGGC GTACCCCCTG CCCACCGAAT GGGACGGCCC CTACGAGAAA
GACACCCTGC TTTAG
|
|---|
| Protein sequence | MEIRASTVLP ARRRPITLHT ADGLALVGEL ALPQDNDPVA TIIFLHPLPT AEGMMDSHVI
RKASYRLPAL ADIAVLRFNT RGTTSRHGTS EGEFGDGEAE RYDVAAAIEF TEFEDLPEPW
LVGWSFGTEL ALKWGHDPAV QGAILLSPPL HRATDADLDA WAEFGRPLVA LVPEYDDYLR
PDEARKRFAR VPHAEVIGVP NARHLWVGEP YVRIVLNEIV KRVAPQAYPL PTEWDGPYEK
DTLL
|
|---|
| |