Gene Tfu_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2395 
Symbol 
ID3580669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp2817712 
End bp2818155 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID637686110 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_290451 
Protein GI72162794 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.754558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCACTC GCATCGACCA CATCGGTATC GCCTGCCGGA ATCTCGACGA AGCCATCCGC 
TTCTACCGGG AGACCTACGG CTTTGAGGTG ACCCACGAGG AGGTCAACGA AGAGCAGGGG 
GTCCGGGAGG CGATGCTGCG GATCAACGGG ACGGACGACG GCGGGGCGAG CTACCTGCAG 
CTCCTGGAGC CGATCTGCGA CGACTCTCCG GTCGCGAAGT TCCTGGAGCG CCACGGGGAG 
GGCGTGCACC ACATCGCGTT CGGCACCGCG GACGTGGCGG AGGCCGCTGC GACGGTCCGG 
GAACGCGGTG TCCGTGTACT CTACGAAACT CCGCGCAACG GCTCGATGGG ATCGTTGATC 
ACTTTCTTGC ACCCGAAAGA CTGTGGCGGG GTGCTCACTG AATTGGTTCA GGCGCGGACG 
GACGGTGCTC CGTCGGCAGA GTAA
 
Protein sequence
MFTRIDHIGI ACRNLDEAIR FYRETYGFEV THEEVNEEQG VREAMLRING TDDGGASYLQ 
LLEPICDDSP VAKFLERHGE GVHHIAFGTA DVAEAAATVR ERGVRVLYET PRNGSMGSLI 
TFLHPKDCGG VLTELVQART DGAPSAE