| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2364 |
|---|
| Symbol | |
|---|
| ID | 3581839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2787781 |
|---|
| End bp | 2788404 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637686079 |
|---|
| Product | Ham1-like protein |
|---|
| Protein accession | YP_290420 |
|---|
| Protein GI | 72162763 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGTA TCAGCACTCT TGTCCTCGCC ACCCGTAACC GCAAGAAGAT CCCTGAACTG
CGTTCCATCT TGGGCGAGGT CGGGCTGGAT ATCGAAGTGC GCAGCCTCGA CGGCTACCCG
GACGCTCCCG AGGTGGCCGA GACGGAAGCG ACGTTCACTG GTAACGCGCT GCTCAAGGCT
CGCGCAATCG CGGAGCACAC CGGGCTTCCT GCGGTGGCGG ACGATTCAGG GCTGCGGGTC
GACGCGTTGA ACGGAATGCC CGGTGTCCTG TCTGCCCGCT GGTCGGGCAG GTTCGGGGCG
CAGCACGGTG ACCGGGATGC GGCCAACCTC GAGCTTGTCT TGGACCAGCT TGCGGATGTT
CCGCCGGAGC GTCGCGGGGC CGAGTTTGTC TGTGCCGCGG CGTTGGCTCT CCCCGACGGG
GAGGAGCACG TGGTGGAAGG GGTACTGCGC GGCAGTCTGA CCACTGAGCC GCGTGGGAAG
AACGGTTTCG GCTACGACCC GATTTTCGTG CCGGAAGGGT ATACGCAGAC CACCGCGGAG
ATGAGCCCGG AGGAGAAGAA CGCGATCAGC CATCGGGGTG TCGCGTTCCG CGCTTTGGCC
AAGAAGATCC GGGAGCTGGG CTGA
|
|---|
| Protein sequence | MSRISTLVLA TRNRKKIPEL RSILGEVGLD IEVRSLDGYP DAPEVAETEA TFTGNALLKA
RAIAEHTGLP AVADDSGLRV DALNGMPGVL SARWSGRFGA QHGDRDAANL ELVLDQLADV
PPERRGAEFV CAAALALPDG EEHVVEGVLR GSLTTEPRGK NGFGYDPIFV PEGYTQTTAE
MSPEEKNAIS HRGVAFRALA KKIRELG
|
|---|
| |