| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2343 |
|---|
| Symbol | |
|---|
| ID | 3581224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2757266 |
|---|
| End bp | 2758927 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637686054 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_290399 |
|---|
| Protein GI | 72162742 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.199199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACTCCG ACACCGCACC GGGGAGCGGA GAGACGTCGG CCACGGGCGG CATCCTCACC
CGCCCCTGGT CCCTGCGTCG GCGCGTCATC GTACTGCTGT GCTCCGTAGG CATTGTCCTC
ATCGCCTCGG TCGCCACCAT CATCATCACC GCGCTGGAAG CACGCGAGGC GGTGGTCCGC
CAGGTAGAGC AGCTCACTCC CGCACAGAGC GCTCTGCACC AGACCATGGC CGCCTACTAC
AACCAGGACA ACGGCATCCG CAGCTACGCG GCCACCGGAA CACTCGACTC GCTGGAGCCC
TACGAGCAGG GCCGCCGTAC CTTGGAGGCG AGCCTCCCCC AGTTGGAGAA GGCCGCCCAA
GACAACCCCG CCATCGACTC CGACATCGAA GCCCTGCTCG CTGCCGGGGA GTCCTGGAGC
AGCGAGTTCG CCGAGCCAGT CCTGGACAAG GTGCGCAACG GTGAGGAACT CACCCACGCC
GACGTCCAAC GCGGTGAAGA ACGCTTCAAC TATCTGCGGG AAGCGTCCAG CAGCGCCCAG
GGGCGCATCA GCGTCGAACT GGACGAAGCC CAAAAAGACC TGGACTCCGC CACCCAGCAG
CTCGCCGCTC TGCTGACCCT CGTGGTCGTG GTCATCATCG TGCTGTGCGG CTTCCTGTGG
GTGATGCTGC AGCACTGGGT GCTCCGCCCG CTCGACGAGC TCGGCCGCCA CCTGCAGCAG
GTCTCGGACG GCTACTACGC GCACCGCATC GAAGTGGAGG CACCCCCCGA GATCGAACGG
GTCGCCTGCA ACGTGGACGC CATGCGGGAG CGCATCGTGC ACGAACTCGA CGAAGTCGGC
ACCGCGCGGC GCGCCCTCCA AGAACAGTCG GAGCTGCTGG AACGCCAAAC CGAAGAACTG
CGCCGCTCCA ACCTGGAGCT GGAGCAGTTC GCTTACGTCG CCTCCCACGA CCTCCAGGAG
CCGCTGCGCA AGGTCGCCAG CTTCTGCCAG TTGCTCCAGC GCCGCTACCA CGGGAAGCTG
GACGAACGCG CCGACGCCTA CATCGACTTC GCGGTCGAAG GAGCCAAACG CATGCAGGTC
CTCATCAACG ACCTGCTGGC GTTCTCCCGG GTGGGGCGGA CCAAGAACTT CACCACCGTG
GACCTCAACA GCGCGCTCAA CGACGCGCTC GCCAGCCTCG AACCGGCGCT CGAGGAAGCC
GAGGCCGTGG TCACCGGGGA TCCGCTCCCG GAAGTGCAGG GCGATCAGAC CCTGCTCACC
CAGGTCTTTT TCAACCTGAT CAGCAATGCC GTGAAGTTCC GCGGGGACAA TCCGGCCCGG
GTGCACATCA GTGTCCGCCG CGAAGGGAAC GAGTGGGTGT TCTGTTGCGC CGATAATGGA
ATCGGCATCG AGCCGCAGTA CGCCGAGCGG ATCTTCGTGA TCTTCCAACG GCTGCACACC
CGCGAGAAGT ACGGCGGCAC AGGGATCGGT CTGGCCATGT GCAAGAAGAT CGTGGAGTTC
CACGGCGGAC GCATCTGGCT GGACGTGGAC TCCGACGAGC CTGGAACCCG GATCTGCTGG
TCGCTGCCGG TAGACACGGA CAAGGACGAC GACCAGTCCG ACGAAGAGCC ATCACCGCTG
ACCGCGTGGT CCGAACCGGA CTCCGCTGGC GCCGACAGAT GA
|
|---|
| Protein sequence | MNSDTAPGSG ETSATGGILT RPWSLRRRVI VLLCSVGIVL IASVATIIIT ALEAREAVVR
QVEQLTPAQS ALHQTMAAYY NQDNGIRSYA ATGTLDSLEP YEQGRRTLEA SLPQLEKAAQ
DNPAIDSDIE ALLAAGESWS SEFAEPVLDK VRNGEELTHA DVQRGEERFN YLREASSSAQ
GRISVELDEA QKDLDSATQQ LAALLTLVVV VIIVLCGFLW VMLQHWVLRP LDELGRHLQQ
VSDGYYAHRI EVEAPPEIER VACNVDAMRE RIVHELDEVG TARRALQEQS ELLERQTEEL
RRSNLELEQF AYVASHDLQE PLRKVASFCQ LLQRRYHGKL DERADAYIDF AVEGAKRMQV
LINDLLAFSR VGRTKNFTTV DLNSALNDAL ASLEPALEEA EAVVTGDPLP EVQGDQTLLT
QVFFNLISNA VKFRGDNPAR VHISVRREGN EWVFCCADNG IGIEPQYAER IFVIFQRLHT
REKYGGTGIG LAMCKKIVEF HGGRIWLDVD SDEPGTRICW SLPVDTDKDD DQSDEEPSPL
TAWSEPDSAG ADR
|
|---|
| |