| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2315 |
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| Symbol | |
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| ID | 3580602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2721869 |
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| End bp | 2722930 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637686024 |
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| Product | putative secreted protein |
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| Protein accession | YP_290371 |
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| Protein GI | 72162714 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0946326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAC GCCGACTGCT GTGGATCGGC TCCTACACCC CTGACTCCGG TATCGCGGGT
CACGCGGCGG GGGTGCAGCG TGTCTGGTTC GACACGGACA CCGCAGCCTT GAGCAAAGCG
GAACTGGCGG CGCCCGCCAG CGGGCCTTCC TTTGTCGTCC CCGCCACGGA CCAGACGATG
GTCTACGCCG TCAACGAGCT CGCCGCGGGA CGGGTCACCG CCTTCGCAGT CCACGACACC
CAGCAGCTCA CCGAGGCAGG CAGCGCCATC ACCGGCGGCT CCTACCCCTG CCACCTGCTG
TACCACCCCG CGGGGCGACA CCTGATCGTC GCCAACTACG GGGACGGCAG CGTGAGCGTG
CATGCCCTCG ACCCGGCCGG CGTCCCCACT GCACCAGTGC AGCGGTTGAC CCACACCGGG
GCGGGCCCCC GCACCGACCG GCAGGAAGGT CCGCACGCCC ACAGCGTCTA CGTGGCCCCG
GGTGGCACCC ACCTGCTGGT CGTCGACCTC GGCACCGACG AACTGCGGTG CTTCCCCTTC
GCCCCGGAGG CGGACCAGCC TGCCGGCCCT CAGCACATCG CGGCCCGCCT GGAACCGGGC
AGCGGACCGC GCCATCTAGC GATCCACTCC TCCGGGCACC TGTATGTGGC CGGAGAACTG
GATTCGCGGG TCTACGTGCT GCGGTTCGAC CCTGCCACGG CCCAGGCCGA GATCCTCGAC
GCGGTGCCCG CCACCGGGGC CGCCGACGAC AACTATCCAG CTGAGATCGC GCTTTCTGCG
GACGAGCGTC GCCTCTACGT CGCCAACCGG GGAGCGGACA CGATCGCCAC CTTCGAAGTG
TCCGCGGACG GTACGCGGAT CCGCCGCCTA GCTGACACCC CCACCGGGGG CGCGTGGCCC
CGCCACTTCG CCCTGGTCGA CGGCTACCTT GTCGTCGCCA ACCAGAACTC TGAGACGTTG
ACCGTCCTCC CCATCGACGC GGAGAGCGGG ATTCCTGGAC CGGCGTGTTC CACCCTGGAC
CTGCCGACGC CGGTGTGCGT CCTGCCTGCC GCGGTCGAAT GA
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| Protein sequence | MTRRRLLWIG SYTPDSGIAG HAAGVQRVWF DTDTAALSKA ELAAPASGPS FVVPATDQTM
VYAVNELAAG RVTAFAVHDT QQLTEAGSAI TGGSYPCHLL YHPAGRHLIV ANYGDGSVSV
HALDPAGVPT APVQRLTHTG AGPRTDRQEG PHAHSVYVAP GGTHLLVVDL GTDELRCFPF
APEADQPAGP QHIAARLEPG SGPRHLAIHS SGHLYVAGEL DSRVYVLRFD PATAQAEILD
AVPATGAADD NYPAEIALSA DERRLYVANR GADTIATFEV SADGTRIRRL ADTPTGGAWP
RHFALVDGYL VVANQNSETL TVLPIDAESG IPGPACSTLD LPTPVCVLPA AVE
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