Gene Tfu_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2301 
Symbol 
ID3579140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2708118 
End bp2709362 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content68% 
IMG OID637686010 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_290357 
Protein GI72162700 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACGC GTCCGGCCCG CAGCGGGCTG CACTCGCTTG CTCAACTGCT CCGCTCCGAC 
GTGGTGGGCG GCTTTCTCCT CATCGGAGGC GCGCTTACCG CGCTGATCTG GGCCAATTCC
CCGTTCGGGC ACGTCTATGA GGCCCTGCGG AGCTTCTCCT TCGGACCGGA AGCACTCCAC
CTGCACCTCA CCGTCGAAGC GTGGGTTGCC GACGGTCTGC TCGCCATCTT CTTCTTCGTC
GTCGGCAACG AGCTCAAACA AGAGTTCGTC CACGGAGAGC TGCGCAACCC CCGCCGGGCG
ATGCTCCCTA TCGTCGCTGC CGTGTGCGGG ATGGCGGTTC CTGCCCTGAT CTACGCGGCC
TTCAACGCGG GTGATCCGGC CCGCCTCCCC GGGTGGGGAA TCCCGATGGC CACCGACATC
GCCTTCGCGG TCGCGATCCT GGCGGTGGTC GGCCGCCACC TGCCCTCCCC GCTCCGCACA
TTCCTGCTCA CCTTGGCCAT CGTGGACGAC CTCGGTGCAA TCATCGTCAT CGCGGTCTTC
TACACCGCTT CCCTCTCCTT CCTGCCCCTG ATCGGTGCGG GGATGCTGCT CGCGGTCTTC
GGCTACCTGC AGCGCGGGCG GGGCGTGGCG GCCCGCCTCA ACTCCGCGGC CCTGCCCAAC
TGGGTGGTCT ACCTTCCGCT CGCCGGCGTG ATCTGGGCCC TCGTCCACGC CAGCGGAGTG
CACGCCACGA TCGCCGGGGT CGCCATGGGG CTGCTCATGC GCACGGTGCC GCTCGCCGGA
GAAAAAGAGT CCCCCAGCCA CCGTCTCGCC CACCTTCTCG GCCCGTGGTC GTCCGGGCTG
GTGCTTCCGG TGTTCGCGGT GATGTCCGCA GGCGTCGTTT TTGCGGGCGG GCTCGGCGCG
GTACTCGACG ACACGGCCGC GCTCGGCATC ATCGCCGGTC TCGTCGTCGG GAAAACAGTG
GGTATCGCCG GCGGCTCCTG GGTGACCACC AAACTCACTG CCGCGGAACT GAGCCCGGCG
CTGCGTTGGA TCGACATCAC CGGCATGGCC CTGCTGGCGG GGATCGGGTT CACCGTCTCC
CTGCTGATTA CCGACCTGTC TTTCCCCGAC TATCCGGAGG CGCTGGTGCA CGCGAAAGCC
GGGGTGCTGT TGGCCTCGCT GCTGGCCACC GTGCTGGGGG CCGTGGTGCT GGCCGTGCGC
AACGCCCACT ACCGGAAGCT GCGCCAGGCG GTTTCCCCGC AATGA
 
Protein sequence
MPTRPARSGL HSLAQLLRSD VVGGFLLIGG ALTALIWANS PFGHVYEALR SFSFGPEALH 
LHLTVEAWVA DGLLAIFFFV VGNELKQEFV HGELRNPRRA MLPIVAAVCG MAVPALIYAA
FNAGDPARLP GWGIPMATDI AFAVAILAVV GRHLPSPLRT FLLTLAIVDD LGAIIVIAVF
YTASLSFLPL IGAGMLLAVF GYLQRGRGVA ARLNSAALPN WVVYLPLAGV IWALVHASGV
HATIAGVAMG LLMRTVPLAG EKESPSHRLA HLLGPWSSGL VLPVFAVMSA GVVFAGGLGA
VLDDTAALGI IAGLVVGKTV GIAGGSWVTT KLTAAELSPA LRWIDITGMA LLAGIGFTVS
LLITDLSFPD YPEALVHAKA GVLLASLLAT VLGAVVLAVR NAHYRKLRQA VSPQ