Gene Tfu_2251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2251 
Symbol 
ID3581472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2650989 
End bp2652461 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content67% 
IMG OID637685959 
Productsodium:alanine symporter 
Protein accessionYP_290307 
Protein GI72162650 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGAAG TGCGATCAAT TCTCTCTGCG GTCAACGACG TTATTTGGGG ACCGTTCGTT 
CTGGTCCCGC TCCTGTTCGT CACGGGAATC TTCCTGACTA TCCGGCTCGG CGGGCTGCAA
TTCCGGCTGC TCGGCCACGC GCTGTGGCTC GCTTTTGTGC GCCGCAAGGA GCAGAGCGGC
GAAGGCGACA TCTCCCACTA CCAGGCTCTC AGCACCGCGC TGGCCGCCAC CGTGGGTGTG
GGCAACATCG CTGGCGCGGC GCTCGCCATC GGCTACGGCG GCCCCGGCGC ACTGTTCTGG
ATGTGGGTGA CCGGCCTGCT GGGCATGGCC ACCAAGTACA GCGAAGCGCT GCTGGGTGTG
AAGTACCGCC GCAGGGACGC CAAAGGCGAG CAAAGCGGTG GCCCCATGTT CTACCTGCGC
TACGGGGTCG GCGGCGGCTT CGGTCTCGTC CTCGGCTTCC TCTTCGCCCT GTTCGGCGCG
ATTGCCGCGT TCGGTATCGG CAACATGACC CAGGCCAACA CGGTGGCCGC CCAGTTGGAG
AACGTCTGGT CGATCCCCAC CTGGCTCACC GGTGCGGCCA TGGTCCTCGT CGTGGCCGCG
GTGGTGCTGG GCGGCATCAA GAGCATCGGC CGGTTCGCCG CCGGTGTGGT GCCCATCATG
ATCGTCGCCT ACGTCCTCAT CGCGGTAACC GTCCTCATCG TGCACGTCAC CGAGCTTCCG
GCGGCGTTCG CTCTCATCTT CCGGGAGGCG TTCACCGGCG AGGCGGCCAC GGGCGGTCTG
CTCGGCTCGG CGCTGCTGTT CGCCATCCAG CAGGGTGTGG CCCGCGGCAT CTTCTCCAAT
GAGTCGGGTC TGGGCACCGG TGGTATCGCT GCGGCGGCCG CCAAGACGAA GCAGCCGGTG
CGGCAGGCCC TCGTGTCGAT GACCCAGACT TTCGTCGACA CCATCATCGT GGTGAGCATG
ACCTGCCTGG TCATCATCGT CACGGGTGCC TGGAGCGAGG CGGAGAAGGA CGACGGCTCC
CTGATGACCT CCCTGGGCAT GGCCGAGGGC TTGGGGAAGA TCTCCCCCGC GTTGGCACCG
CTCGGCAACT ACACCGTGGC GCTCGCGGTG GTGTTCTTCG CCTTCACCAC CCTGGTCGGC
TGGTGCTACT ACGGTGAGCG CTGCATGGAG TACCTGGCTG GCCGGAAAGC GGTGGTGCCG
TTCCGCATCG TGTTCACCCT GGTGGTGTTC GTCGGCGCCA CCACCGAGCT GAGCACGGTA
TGGACGTTCA GCGACATGGC CAACGGCCTG ATGGCCCTGC CTAACCTGCT GGGGCTTCTC
CTGCTCTCGC CGATCGTGGT GGCCGAGACA AAGAAGTACT TCGCCAACCC GCACTGGCGC
AACCCTGACC TGATGGAGGG GCCCGACCCG GGCACCGCGG AGCCGCCCGA ACGGAGCCCG
CAAGGGGACA ATCCCCCCAC CCCCACCCGG TAA
 
Protein sequence
MEEVRSILSA VNDVIWGPFV LVPLLFVTGI FLTIRLGGLQ FRLLGHALWL AFVRRKEQSG 
EGDISHYQAL STALAATVGV GNIAGAALAI GYGGPGALFW MWVTGLLGMA TKYSEALLGV
KYRRRDAKGE QSGGPMFYLR YGVGGGFGLV LGFLFALFGA IAAFGIGNMT QANTVAAQLE
NVWSIPTWLT GAAMVLVVAA VVLGGIKSIG RFAAGVVPIM IVAYVLIAVT VLIVHVTELP
AAFALIFREA FTGEAATGGL LGSALLFAIQ QGVARGIFSN ESGLGTGGIA AAAAKTKQPV
RQALVSMTQT FVDTIIVVSM TCLVIIVTGA WSEAEKDDGS LMTSLGMAEG LGKISPALAP
LGNYTVALAV VFFAFTTLVG WCYYGERCME YLAGRKAVVP FRIVFTLVVF VGATTELSTV
WTFSDMANGL MALPNLLGLL LLSPIVVAET KKYFANPHWR NPDLMEGPDP GTAEPPERSP
QGDNPPTPTR