Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2227 |
Symbol | |
ID | 3580934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2623447 |
End bp | 2624526 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685935 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_290283 |
Protein GI | 72162626 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.491741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTAC AAATCGTCCT CATCGCCCTC GCGATCCTTG TCGTCCTGGG CGTGATGTCC ACCGTACGGA TCGTCCCCCA GGCGCGCGCC TACAACGTGG AGCGCTTCGG CCGCTACCTG CGGACCCTGC AACCGGGCCT CAACTTCATC GTCCCCATCG TGGACCGAGT CAGCACCAAG TTCGACCTGC GGGAACAGGT GCTGTCGTCC CGCCCGCAGC CGGTGATCAC CGAGGACAAC CTCGTGGTCA ACATCGACAC CGTCCTCTAC TACCAGATCA CCGACCCGCG GGCCGCCGCC TACGAAGTCG CCAACTACCT GCAGGCCATC GACCAGCTCA CCATCACCAC CCTGCGTAAC GTCATCGGCG GCATGGACTT GGAGCGGACG CTCACGTCCC GGGAGGAGAT CAACTCGCGG CTGCGCGGGG TGCTGGACGA AGCCACCGGC AAGTGGGGTA TCCGCGTCAA CCGGGTCGAG ATCAAAGCCA TCGACCCGCC GCCCACCATC AAAGAGGCCA TGGAAAAGCA GATGCGGGCC GAACGCGACA AGCGTGCCGC GATCCTGCAC GCGGAAGGGG AACGCCAGTC CCGGATCCTC AAAGCCGAAG GTGCCCGCCA GCAGGCCATC TTGGAAGCGC AGGGTGAGCA GCAGGCCGCG ATCCTCCGTG CCGACGGTGA AGCCAAAGCC ATTGAACGGG TCTTCCAGGC GGTGCACGCC AACAACGCCG ACGCCAAGCT GCTGGCGTAC AAGTACCTGG AGACGCTGCC GACGCTCGCA CAAGGCCAGG GCAACACGTT CTGGGTGATC CCCGGGGAGC TCACCCAGGC GATCCAGCAC TTGAGCCAGG CGTTCGCCCC GAACCGCGAG GGCGCTTCCG CTGAGACAGC GCAGGAGGAG CCGGCTGCTG CAGCGGAGAC ACCTCCCGAG CTCACCCAGA GCGACGGCCC CAGCGCTGAA ACGCTGCACG CCGCCGACGT GGCCGCTGAC CAAGCGGCCA AAGCGGTCAA AGAAGCGAAG AATGAGGCCC AGGCCGCAGC TTCTCCCCAT TTGCCGAGCC AGCGCGACAC GCAGTCGTAG
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Protein sequence | MALQIVLIAL AILVVLGVMS TVRIVPQARA YNVERFGRYL RTLQPGLNFI VPIVDRVSTK FDLREQVLSS RPQPVITEDN LVVNIDTVLY YQITDPRAAA YEVANYLQAI DQLTITTLRN VIGGMDLERT LTSREEINSR LRGVLDEATG KWGIRVNRVE IKAIDPPPTI KEAMEKQMRA ERDKRAAILH AEGERQSRIL KAEGARQQAI LEAQGEQQAA ILRADGEAKA IERVFQAVHA NNADAKLLAY KYLETLPTLA QGQGNTFWVI PGELTQAIQH LSQAFAPNRE GASAETAQEE PAAAAETPPE LTQSDGPSAE TLHAADVAAD QAAKAVKEAK NEAQAAASPH LPSQRDTQS
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