Gene Tfu_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2227 
Symbol 
ID3580934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2623447 
End bp2624526 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID637685935 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_290283 
Protein GI72162626 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.491741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTAC AAATCGTCCT CATCGCCCTC GCGATCCTTG TCGTCCTGGG CGTGATGTCC 
ACCGTACGGA TCGTCCCCCA GGCGCGCGCC TACAACGTGG AGCGCTTCGG CCGCTACCTG
CGGACCCTGC AACCGGGCCT CAACTTCATC GTCCCCATCG TGGACCGAGT CAGCACCAAG
TTCGACCTGC GGGAACAGGT GCTGTCGTCC CGCCCGCAGC CGGTGATCAC CGAGGACAAC
CTCGTGGTCA ACATCGACAC CGTCCTCTAC TACCAGATCA CCGACCCGCG GGCCGCCGCC
TACGAAGTCG CCAACTACCT GCAGGCCATC GACCAGCTCA CCATCACCAC CCTGCGTAAC
GTCATCGGCG GCATGGACTT GGAGCGGACG CTCACGTCCC GGGAGGAGAT CAACTCGCGG
CTGCGCGGGG TGCTGGACGA AGCCACCGGC AAGTGGGGTA TCCGCGTCAA CCGGGTCGAG
ATCAAAGCCA TCGACCCGCC GCCCACCATC AAAGAGGCCA TGGAAAAGCA GATGCGGGCC
GAACGCGACA AGCGTGCCGC GATCCTGCAC GCGGAAGGGG AACGCCAGTC CCGGATCCTC
AAAGCCGAAG GTGCCCGCCA GCAGGCCATC TTGGAAGCGC AGGGTGAGCA GCAGGCCGCG
ATCCTCCGTG CCGACGGTGA AGCCAAAGCC ATTGAACGGG TCTTCCAGGC GGTGCACGCC
AACAACGCCG ACGCCAAGCT GCTGGCGTAC AAGTACCTGG AGACGCTGCC GACGCTCGCA
CAAGGCCAGG GCAACACGTT CTGGGTGATC CCCGGGGAGC TCACCCAGGC GATCCAGCAC
TTGAGCCAGG CGTTCGCCCC GAACCGCGAG GGCGCTTCCG CTGAGACAGC GCAGGAGGAG
CCGGCTGCTG CAGCGGAGAC ACCTCCCGAG CTCACCCAGA GCGACGGCCC CAGCGCTGAA
ACGCTGCACG CCGCCGACGT GGCCGCTGAC CAAGCGGCCA AAGCGGTCAA AGAAGCGAAG
AATGAGGCCC AGGCCGCAGC TTCTCCCCAT TTGCCGAGCC AGCGCGACAC GCAGTCGTAG
 
Protein sequence
MALQIVLIAL AILVVLGVMS TVRIVPQARA YNVERFGRYL RTLQPGLNFI VPIVDRVSTK 
FDLREQVLSS RPQPVITEDN LVVNIDTVLY YQITDPRAAA YEVANYLQAI DQLTITTLRN
VIGGMDLERT LTSREEINSR LRGVLDEATG KWGIRVNRVE IKAIDPPPTI KEAMEKQMRA
ERDKRAAILH AEGERQSRIL KAEGARQQAI LEAQGEQQAA ILRADGEAKA IERVFQAVHA
NNADAKLLAY KYLETLPTLA QGQGNTFWVI PGELTQAIQH LSQAFAPNRE GASAETAQEE
PAAAAETPPE LTQSDGPSAE TLHAADVAAD QAAKAVKEAK NEAQAAASPH LPSQRDTQS