| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2224 |
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| Symbol | cobD |
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| ID | 3580931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2621232 |
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| End bp | 2622200 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637685932 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_290280 |
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| Protein GI | 72162623 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAAAA AGCGTCACAC CTCTCGCCGG ACGTGGGCGT GGGGGCTCGT AGCGGGAGCC
GCCGTGGACC GGGTCGTTGC CGACCCCCAG CGCGGCCATC CGGTGGCGTT GTTCGGCACC
GCCGCGGCAC GCCTGGAGCG GCTGCTGTAT GCGCCCAGCC GGGTGCGGGG CGCCCTGTTC
GCTGCCGCGG CCCTCGCCCC CGTCGCCGCC CTTGGGGCAT TCGCTGACAC GCGTACCGGG
CGCTGGCGTG CTCTCGCGGT CACTGCCGCG ACGTGGACCG TAGTCGGCGG AGCCATGCTG
GAACGGGAAG CTGCGGCCCT CGCCGACGCC CTGCACTCCG GGGACCTGGC CGAAGCACGG
CGCCGCCTAC CTCACCTCTG CGGCCGGGAC CCCCGGGGTC TCGACGAGCA GGCCCTCGCC
CGCGCCACGA TCGAATCCGT GGCTGAGAAC ACCTCGGACG CGGTGGTCGC CCCCCTGGTG
TGGGGTGCCC TGCTCGGGTG CACCGGGCTG CTCACCTACC GTGCCGTCAA CACCCTCGAC
GCGATGGTCG GCCACCGCTC TACCCGGTAT GCGCGGTTCG GCTGGGCCGC AGCCCGCCTG
GACGACATGG CCAACTGGGC GCCGTCCCGG CTCACCGCCC TGCTCGCGGT GGCCGCCGCC
CCGCTCATCG GGGGTGATCC GCGTCGCGCG TGGCGGAGCT GGATCCGCGA CGGACAGCGT
CATCCCAGCC CGAACGCGGG CCAGTGCGAG GCCGCATTCG CCGGGGCGCT CGGGGTGCGC
CTCGGCGGGC GCAACATCTA CGACGGCAGG GTGGAAGAGC GGCCCCAGCT CGGTGACGGC
CCGCCTCCCG CAGCAGCGGA CATTCACCGC GCCATCCGCC TCAGCCGGGC TGTCACGGTG
GGGGCTGTCC TGCTTACCGC GGCCGCTGCC TGGGGACTGG CCGTAGGAGA CCGCCGCGGA
AGGCGTTGA
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| Protein sequence | MRKKRHTSRR TWAWGLVAGA AVDRVVADPQ RGHPVALFGT AAARLERLLY APSRVRGALF
AAAALAPVAA LGAFADTRTG RWRALAVTAA TWTVVGGAML EREAAALADA LHSGDLAEAR
RRLPHLCGRD PRGLDEQALA RATIESVAEN TSDAVVAPLV WGALLGCTGL LTYRAVNTLD
AMVGHRSTRY ARFGWAAARL DDMANWAPSR LTALLAVAAA PLIGGDPRRA WRSWIRDGQR
HPSPNAGQCE AAFAGALGVR LGGRNIYDGR VEERPQLGDG PPPAAADIHR AIRLSRAVTV
GAVLLTAAAA WGLAVGDRRG RR
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