Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2219 |
Symbol | |
ID | 3580925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2611158 |
End bp | 2613179 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685926 |
Product | GTPase |
Protein accession | YP_290275 |
Protein GI | 72162618 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGACC ACACAGCCGA CCATGTGGCA GGCGGGCCCC CACCCGTGGA TCGCTCTGGC GAGGGCGGCG AGTTTCGCGC CGCAGACTCT GGTGGCCGGG CCCACGACGG GTTCCGGTAC CGGGTGCCGC TCACCCCGGC CGCCCGTCCA GTCGACGGCG GTTTCTCTTC CCGGGGCAGT CCCATCGTGC CGGTGGACAG CCCGTCGCCG GCGGAGGAGA AGCGCACCGA CCCGGATGAT CCGGACAACC TCGCCGGCTG GGTGGGGAGT CTCGCCGAGG TGAAGGAAGG CGAGATGATC GCCGGACGCC GCACCGGTCC GGTGCCCACG GTGCCCCCCC GGCCTGCGGT CACGCCTTCC TGGCTGTCCG AGGACGACGA GGAGGAGTAC CAGCCTACGC GGGGCGACCT GCGGCAGCCG ATGCCGACCA CGACCCGCGC GGAGCTGATC TCGCAACTCG ATGCGCTTGC GCTCCTCGTC GAACTGGGCC GCGACTATTT CGCTCCGCAG TTGATTGAAC GTGCCCGCCG CCTGCTCACC CAGGCGGGGG CGCGGCTGCG GCTGTCCGCC GACCACACGG TGGTCGCGCT GGCCGGGGGG ACCGGAAGCG GTAAGTCCTC ACTGTTCAAC GCCTTGTGCG GCCTGGAGTT GTCCCGCGTG GGAGTGACCC GGCCGACGAC CACCGCTGCC CACGCCTGCG TGTGGGGGAC GGAAGGCGCC GACAACCTGC TCGACTGGTT GGGGGTTCCG CCCCGCTACC GGCACTCCCG GGTGAGCGAA CTCGACCGCG GCGAATCCGA CCTCACCGGG CTCATCCTGC TGGACCTGCC CGACCACGAC TCGGTGCGGG CCGCGCAGAC CGCCGAGTCC GACCATCTCA TCCGGACCGC GGACCTCCTG ATCTGGGTGT TGGACCCGCA GAAGTACGCC GACGCCGCGG TTCACCACCG CTATCTTGCG GAGATGTCCG GGCACGGGGC AGTCATGGTG GCGGTCCTCA ACCAGGTTGA CCGGGTGGAG CCGGACGATG TGGAGGAGCT GCTCACCGAC TTGCGGAGAC TGCTGGAGGA CGAGTCGGGA GTCCACCCCC GGATCTTGAC CACGTCTGCG GTCACCGGGG AAGGGCTGCG CGAACTGCGG CAACTCCTAG TGGAGACCGT TGCCGATCGG CGTGCCGCGA TCGAGCGCCT CGCCGCCGAC CTTGAGCAGG TCGTCGCCGA CTTTGCTGCT TACGGTGAGG CGGGCGGCAC CGCGGAGCTG CCCCCGCCGG CCCGGTCTGT CCTGATGGAC CAGATGGCTG AGGCCAGCGG GGTGGAGGCG GTTGCTGAAG CGGTGGAGAC CGCCTACCAG CGGCGCGGGG GACGGGCCGT GGGGTGGCCG CTGCCCCGCT GGGCGCGGCG GCTGCGCCGC GACCCGCTGC GCGTGACCCA GCTTGATTTC CTCACTGAGG ACACGACCCA GGCGAGCACC GGTCCAGTGG GGGCGCAACG CGCCGAGATC GACACCGCGA TCGCGGCGGC AGCGGAGGCC GCGGCCGGTT CGCTGCCGGA CCCGTGGCCC AAGCGGGTGC GGGCGGCTGC GCGCAAACAC GTGGAGACGC TCCCCGAAGA GCTGGGCTCC GCGATTGCAG CGACGATCCC TGAAGAGGAC GCCCCCTTCT GGTGGGGGGC TGTGCGGGCT GTCCAGTACT TGCTGGTGGC GCTGGCCGGA GGCAGCCTGG TGTGGCTGGC GCTGCTGCTG GTCAGTTGGG TCGGCGGCGG CCTGGTGGAA CCGGCGCTGC TGTTCTTGAC CGCTGCCTTG ACCGGAGGTG CGCTGCTGTT GGGCTGGCTG GTTGGCGTGG GCTGCCGCAG CCTGGTCGAG GTGGAGGCTG CCCGCCAACG CGAATACGTC GAGATGCACG GTCTTGAACA GGTCAGACGC ATTACGTTGG AGCGCGTCGT CGCCCCGTTG GAGGAGGAGC TGCGCAACTA CGAGCGGTTC TGCCAGGCGT TGGAGGAAGC GCAGCCTGCC CGACGCCGGT GA
|
Protein sequence | MADHTADHVA GGPPPVDRSG EGGEFRAADS GGRAHDGFRY RVPLTPAARP VDGGFSSRGS PIVPVDSPSP AEEKRTDPDD PDNLAGWVGS LAEVKEGEMI AGRRTGPVPT VPPRPAVTPS WLSEDDEEEY QPTRGDLRQP MPTTTRAELI SQLDALALLV ELGRDYFAPQ LIERARRLLT QAGARLRLSA DHTVVALAGG TGSGKSSLFN ALCGLELSRV GVTRPTTTAA HACVWGTEGA DNLLDWLGVP PRYRHSRVSE LDRGESDLTG LILLDLPDHD SVRAAQTAES DHLIRTADLL IWVLDPQKYA DAAVHHRYLA EMSGHGAVMV AVLNQVDRVE PDDVEELLTD LRRLLEDESG VHPRILTTSA VTGEGLRELR QLLVETVADR RAAIERLAAD LEQVVADFAA YGEAGGTAEL PPPARSVLMD QMAEASGVEA VAEAVETAYQ RRGGRAVGWP LPRWARRLRR DPLRVTQLDF LTEDTTQAST GPVGAQRAEI DTAIAAAAEA AAGSLPDPWP KRVRAAARKH VETLPEELGS AIAATIPEED APFWWGAVRA VQYLLVALAG GSLVWLALLL VSWVGGGLVE PALLFLTAAL TGGALLLGWL VGVGCRSLVE VEAARQREYV EMHGLEQVRR ITLERVVAPL EEELRNYERF CQALEEAQPA RRR
|
| |