Gene Tfu_2209 details

Gene Information

• Locus tag: Tfu_2209
• ID: 3581122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2598386
• End bp: 2600263
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637685916
• Product: dihydroxyacid dehydratase
• Protein accession: YP_290265
• Protein GI: 72162608
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCGC TTCGTTCACG GACGGTCACC CACGGCAGAA ACATGGCCGG TGCCCGCGCG 
CTGCTGCGCG CCACCGGCGT GGCACGCGAA GACTTCGGCA AACCCATCGT GGCGGTGGCC 
AACAGCTATA CCCAGTTTGT GCCCGGACAC GTGCACCTGC GCGAAGTCGC CGACGTCGTG 
GCTGACGCGG TGCGCGCGGC AGGCGGCGTG CCGCGCGAGT TCAACACCAT CGCGGTCGAC 
GACGGCATCG CCATGGGGCA CGGCGGCATG CTGTACTCCC TGCCCAGCCG CGAACTGATC 
GCCGACGCCG TGGAGTACAT GGTCAACGCG CACTGCGCTG ACGCCCTCGT GTGCGTGTCC 
AACTGCGACA AGATCACCCC CGGCATGCTG CTGGCCGCAC TGCGGCTGAA CATCCCCACC 
GTGTTCGTCT CGGGTGGGCC GATGGAAGCC GGAAAGGTGA CCGTAGTCAA CGGCACTGCG 
ACGACGGTGC GCAAACTCGA CCTGATCAAC CCGATGATCG CCTCGGCGGA CGAGAACGTC 
TCCGAGCAGG AGCTGAACGC GCTGGAAGAA GCAGCCTGCC CCACCTGCGG CTCCTGCTCG 
GGCATGTTCA CCGCCAACTC GATGAACTGC TTGACCGAGG CGATCGGCTT GGCGCTGCCC 
GGCAACGGCA CAGTGCTGGC GACCCACACC GCGCGCAAGA AGCTCTACGA GGAAGCGGGC 
CGGGTGGTCG TGGAGGCGGC GCGCCGCTAC TACGAAAAGG ACGACGAGTC GGTGCTGCCG 
CTGTCGATCG CCACGCCGGC GGCGTTCGCA AACGCCATGG CCTTGGACGT GGCCATGGGC 
GGCTCCACAA ACACGATCCT GCACCTGCTG GCCGCGGCAA CCGAAGCCGG CGTGGACTTC 
GGCCTCGACG ACATCGACGC CCTGTCCCGC CGAGTGCCGT GCCTGTGCAA GGTCGCCCCG 
AACAGCGACA AGTACCACAT CGAGGACGTC CACCGGGCGG GCGGTATCCC CGCCATCATG 
GGCGAGCTGG CCCGCGCCGG GTTGGTGGAC ACGTCGCTGC CCATGGTGCA CGGGATGACC 
GTGGGCGAGT ACGTGGACGC CTGGGACATC GCCTCCCCGA ATGTGCGTCC CGAAGCGGTG 
GAGCTCTTCC ACGCAGCTCC GGGCGGCCAG CGCAGCACTG AGGCGTTCTC GCAGAGCACT 
CGGTGGGATT CGCTGGACCT GGACCGCGAG TCCGGGTGCA TCCGCTCGGT GAAGCACGCT 
TACACCAAGG ACGGCGGCCT GGCCGTGCTC AAAGGCAACC TCGCCCCGGA CGGCGCGGTC 
GTCAAGACCG CGGGAGTCGA CGAGGAACTG TGGACCTTCA GCGGCCCGGC CAAGGTGTTC 
GAAAGCCAGG AGGAAGCGGT CGACGGCATC CTCAACAAGG CGGTGCAGCC CGGTGACGTG 
GTGGTCATCC GCTACGAGGG CCCCAAGGGC GGTCCGGGCA TGCAGGAGAT GTTGTACCCG 
ACGAGCTTCC TCAAGGGTCG CGGTCTGGGC AAGGTGTGCG CCCTGATCAC CGACGGCCGG 
TTCTCCGGCG GCACCTCAGG GCTGTCGATT GGGCACGCCT CACCGGAGGC GGCCGCCGGC 
GGCGACATCG CCCTGGTCGA GGACGGTGAC ATCATCACCA TCGACATCCC CAACCGGTCG 
ATCACTTTGG AAGTGCCGGA GGACGAACTC AACGCCCGCC GGGAGCGTCT CCTCAAGGAA 
CTGGGCGGAT TCCGGCCGCG GAACCGGCAG CGCCCGGTGA GCGCGGCGCT CCGCGCCTAC 
GCGGCGATGG CCACTTCGGC TTCTACGGGA GCCGCCCGAG ACGTCAGCCA GGTGGAGCGC 
ACGCATCTCC ACTCGTAA 

 

Protein sequence

MPALRSRTVT HGRNMAGARA LLRATGVARE DFGKPIVAVA NSYTQFVPGH VHLREVADVV 
ADAVRAAGGV PREFNTIAVD DGIAMGHGGM LYSLPSRELI ADAVEYMVNA HCADALVCVS 
NCDKITPGML LAALRLNIPT VFVSGGPMEA GKVTVVNGTA TTVRKLDLIN PMIASADENV 
SEQELNALEE AACPTCGSCS GMFTANSMNC LTEAIGLALP GNGTVLATHT ARKKLYEEAG 
RVVVEAARRY YEKDDESVLP LSIATPAAFA NAMALDVAMG GSTNTILHLL AAATEAGVDF 
GLDDIDALSR RVPCLCKVAP NSDKYHIEDV HRAGGIPAIM GELARAGLVD TSLPMVHGMT 
VGEYVDAWDI ASPNVRPEAV ELFHAAPGGQ RSTEAFSQST RWDSLDLDRE SGCIRSVKHA 
YTKDGGLAVL KGNLAPDGAV VKTAGVDEEL WTFSGPAKVF ESQEEAVDGI LNKAVQPGDV 
VVIRYEGPKG GPGMQEMLYP TSFLKGRGLG KVCALITDGR FSGGTSGLSI GHASPEAAAG 
GDIALVEDGD IITIDIPNRS ITLEVPEDEL NARRERLLKE LGGFRPRNRQ RPVSAALRAY 
AAMATSASTG AARDVSQVER THLHS