Gene Tfu_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2197 
Symbol 
ID3581110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2580770 
End bp2582653 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content68% 
IMG OID637685904 
ProductABC-type multidrug transport system ATPase and permease components 
Protein accessionYP_290253 
Protein GI72162596 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATAA GCGGTCACCG CACAGTCTGG ACGCTGGTCA ACGACGGTTC GGCTGCCAAG 
GCAGCGCTCC AGCCGGGCAC CGTGCGGCGC GTCCTCAGCT ACGCCCGTCC GCACTGGCGG
CGCATCCTGC TGTTCGTGCT GGCTACCTCG GTCGGCTCCG GCATCATCAT CGCCAACCCC
CTGCTGCTCA AAACGATCAT CGACCGCGGG ATCGGCGCCA ACAATCCGTC TCTCGTGGTC
GGGCTTTCCC TGGTCGTGGC CGTGCTGGCG CTGCTGGAGA CCGGGCTCAG CCTGGTGAGC
CGGTGGCTGT CCGCGAGCAT CGGCGAAGGG GTCATCTACC GGCTGCGCAC CCAAGCGTTC
ACCCACGTGC AGCGCATGCC GCTGGCGTTC TTCACCCGCA CGCAGACCGG GTCGCTGATC
AGCCGGCTCA ACACCGACGT GGTGGGGGCG CAGCGGGCCG TCACTTCGGT CCTGCAGTCG
CTGGTCGCCA ACTCGGTGAG CGTAGTGGCG GTGCTCAGCG CCATGCTCGC CCTCTCCTGG
CCGATCACCA CGGCCGCGCT CCTCGTGATC CCGCTGTTCC TGCTCCCCGC ACGCTACCTG
GGCCGCCGCC TCGCCCAAGT CCACCGCACG AGCATGGACG TGAACGCGGA GATGAGCTCG
ATGATGAGCG AGCGCTTCAA CGTGGGGGGC GCCATGCTCG TCAAACTGTA CGGCCGCCCC
GACGAGGAGA GCGCGGAGTT CGCAGCCCGC GCGGGACGCG TGCGGGACAT CGGCGTCACC
AGAAGCGTCT ACAGCGGGAT GCTCTTCTCC GTACTGGGGC TGATCACCGC GCTCGCCACC
GCCATGGTCT ATGGGGCGGG CGGCCTGCTG GTGGTGCACG ACACTTTCGA AGTGGGCACG
CTCGTGGCGC TGGCGACCCT GCTGACCCGG CTGTACGGCC CGGTGACCGC GCTCTCCAAC
GTCCAAGTGG ATGTGATGAC CGCCCTGGTC AGCTTCGAGC GTGTCTTCGA AGTGCTGGAC
ATGAAACCGT CCGTGGCCGA ACCCGAGAAC CCGGTCGACC TCCCCGCGGG CGGCCTGTCC
GTAGAGTTCT CCAACGTCTC CTTCCGCTAC CCGGGCGCCG AAGCCACCCT GGAGTCACTG
GAACTCGTGC CACAGCCGGA GCACTCTGTC AGCACCCAAG TGCTCAGCGA CATCACGTTC
ACTGTCCAGC CCGGGCAGAT GGTGGCCCTG GTAGGTCCGT CCGGGGCAGG CAAGACGACG
CTCACCCACC TGGTGTCCCG GCTGTACGAC CCCACCGAGG GCACGGTCCG GATCGGCGGA
GTGGACCTGC GCCAGGTGCG CACCCAGTCG CTGCGGGATG CGGTCGGCGT GGTCACCCAG
GACACGCAGT TGTTCCACGA CACCATCCGG GCGAACTTGC GCTACGCCCG TCCGGACGCC
ACCGACGAGG AGCTCATCGC GGCGATGCGC GCCGCACACC TCGACGCGCT GCTGGAAACC
CTGCCCGAAG GGTTGGACAC CGTGGTCGGA GACCGCGGCT ACCGTCTTTC CGGCGGAGAG
AAGCAGCGGC TGGCCATCGC CCGGCTCCTG TTGAAATCCC CGTCCGTGGT GGTGCTGGAC
GAGGCGACAG CCCACCTGGA CTCCGAGTCC GAAGCCGCGG TCCAGCAGGC CCTGGCGACC
GCGCTGCACG GGCGGACCTC GCTGGTCATC GCCCACCGTC TGGCCACGGT CCGTGAAGCC
GACCTGATCC TCGTGCTCGA AGACGGCCGC ATCCTGGAAC GCGGGACCCA CGAGGAGCTG
CTGGCCCGTG GCGGCTTGTA CACAGCCCTG TACCGGACCC AGTTCGCCCC GCAGGAGCGG
GAGCGGCGCA GCACCGCGAA CTGA
 
Protein sequence
MVISGHRTVW TLVNDGSAAK AALQPGTVRR VLSYARPHWR RILLFVLATS VGSGIIIANP 
LLLKTIIDRG IGANNPSLVV GLSLVVAVLA LLETGLSLVS RWLSASIGEG VIYRLRTQAF
THVQRMPLAF FTRTQTGSLI SRLNTDVVGA QRAVTSVLQS LVANSVSVVA VLSAMLALSW
PITTAALLVI PLFLLPARYL GRRLAQVHRT SMDVNAEMSS MMSERFNVGG AMLVKLYGRP
DEESAEFAAR AGRVRDIGVT RSVYSGMLFS VLGLITALAT AMVYGAGGLL VVHDTFEVGT
LVALATLLTR LYGPVTALSN VQVDVMTALV SFERVFEVLD MKPSVAEPEN PVDLPAGGLS
VEFSNVSFRY PGAEATLESL ELVPQPEHSV STQVLSDITF TVQPGQMVAL VGPSGAGKTT
LTHLVSRLYD PTEGTVRIGG VDLRQVRTQS LRDAVGVVTQ DTQLFHDTIR ANLRYARPDA
TDEELIAAMR AAHLDALLET LPEGLDTVVG DRGYRLSGGE KQRLAIARLL LKSPSVVVLD
EATAHLDSES EAAVQQALAT ALHGRTSLVI AHRLATVREA DLILVLEDGR ILERGTHEEL
LARGGLYTAL YRTQFAPQER ERRSTAN