Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2197 |
Symbol | |
ID | 3581110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2580770 |
End bp | 2582653 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685904 |
Product | ABC-type multidrug transport system ATPase and permease components |
Protein accession | YP_290253 |
Protein GI | 72162596 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATAA GCGGTCACCG CACAGTCTGG ACGCTGGTCA ACGACGGTTC GGCTGCCAAG GCAGCGCTCC AGCCGGGCAC CGTGCGGCGC GTCCTCAGCT ACGCCCGTCC GCACTGGCGG CGCATCCTGC TGTTCGTGCT GGCTACCTCG GTCGGCTCCG GCATCATCAT CGCCAACCCC CTGCTGCTCA AAACGATCAT CGACCGCGGG ATCGGCGCCA ACAATCCGTC TCTCGTGGTC GGGCTTTCCC TGGTCGTGGC CGTGCTGGCG CTGCTGGAGA CCGGGCTCAG CCTGGTGAGC CGGTGGCTGT CCGCGAGCAT CGGCGAAGGG GTCATCTACC GGCTGCGCAC CCAAGCGTTC ACCCACGTGC AGCGCATGCC GCTGGCGTTC TTCACCCGCA CGCAGACCGG GTCGCTGATC AGCCGGCTCA ACACCGACGT GGTGGGGGCG CAGCGGGCCG TCACTTCGGT CCTGCAGTCG CTGGTCGCCA ACTCGGTGAG CGTAGTGGCG GTGCTCAGCG CCATGCTCGC CCTCTCCTGG CCGATCACCA CGGCCGCGCT CCTCGTGATC CCGCTGTTCC TGCTCCCCGC ACGCTACCTG GGCCGCCGCC TCGCCCAAGT CCACCGCACG AGCATGGACG TGAACGCGGA GATGAGCTCG ATGATGAGCG AGCGCTTCAA CGTGGGGGGC GCCATGCTCG TCAAACTGTA CGGCCGCCCC GACGAGGAGA GCGCGGAGTT CGCAGCCCGC GCGGGACGCG TGCGGGACAT CGGCGTCACC AGAAGCGTCT ACAGCGGGAT GCTCTTCTCC GTACTGGGGC TGATCACCGC GCTCGCCACC GCCATGGTCT ATGGGGCGGG CGGCCTGCTG GTGGTGCACG ACACTTTCGA AGTGGGCACG CTCGTGGCGC TGGCGACCCT GCTGACCCGG CTGTACGGCC CGGTGACCGC GCTCTCCAAC GTCCAAGTGG ATGTGATGAC CGCCCTGGTC AGCTTCGAGC GTGTCTTCGA AGTGCTGGAC ATGAAACCGT CCGTGGCCGA ACCCGAGAAC CCGGTCGACC TCCCCGCGGG CGGCCTGTCC GTAGAGTTCT CCAACGTCTC CTTCCGCTAC CCGGGCGCCG AAGCCACCCT GGAGTCACTG GAACTCGTGC CACAGCCGGA GCACTCTGTC AGCACCCAAG TGCTCAGCGA CATCACGTTC ACTGTCCAGC CCGGGCAGAT GGTGGCCCTG GTAGGTCCGT CCGGGGCAGG CAAGACGACG CTCACCCACC TGGTGTCCCG GCTGTACGAC CCCACCGAGG GCACGGTCCG GATCGGCGGA GTGGACCTGC GCCAGGTGCG CACCCAGTCG CTGCGGGATG CGGTCGGCGT GGTCACCCAG GACACGCAGT TGTTCCACGA CACCATCCGG GCGAACTTGC GCTACGCCCG TCCGGACGCC ACCGACGAGG AGCTCATCGC GGCGATGCGC GCCGCACACC TCGACGCGCT GCTGGAAACC CTGCCCGAAG GGTTGGACAC CGTGGTCGGA GACCGCGGCT ACCGTCTTTC CGGCGGAGAG AAGCAGCGGC TGGCCATCGC CCGGCTCCTG TTGAAATCCC CGTCCGTGGT GGTGCTGGAC GAGGCGACAG CCCACCTGGA CTCCGAGTCC GAAGCCGCGG TCCAGCAGGC CCTGGCGACC GCGCTGCACG GGCGGACCTC GCTGGTCATC GCCCACCGTC TGGCCACGGT CCGTGAAGCC GACCTGATCC TCGTGCTCGA AGACGGCCGC ATCCTGGAAC GCGGGACCCA CGAGGAGCTG CTGGCCCGTG GCGGCTTGTA CACAGCCCTG TACCGGACCC AGTTCGCCCC GCAGGAGCGG GAGCGGCGCA GCACCGCGAA CTGA
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Protein sequence | MVISGHRTVW TLVNDGSAAK AALQPGTVRR VLSYARPHWR RILLFVLATS VGSGIIIANP LLLKTIIDRG IGANNPSLVV GLSLVVAVLA LLETGLSLVS RWLSASIGEG VIYRLRTQAF THVQRMPLAF FTRTQTGSLI SRLNTDVVGA QRAVTSVLQS LVANSVSVVA VLSAMLALSW PITTAALLVI PLFLLPARYL GRRLAQVHRT SMDVNAEMSS MMSERFNVGG AMLVKLYGRP DEESAEFAAR AGRVRDIGVT RSVYSGMLFS VLGLITALAT AMVYGAGGLL VVHDTFEVGT LVALATLLTR LYGPVTALSN VQVDVMTALV SFERVFEVLD MKPSVAEPEN PVDLPAGGLS VEFSNVSFRY PGAEATLESL ELVPQPEHSV STQVLSDITF TVQPGQMVAL VGPSGAGKTT LTHLVSRLYD PTEGTVRIGG VDLRQVRTQS LRDAVGVVTQ DTQLFHDTIR ANLRYARPDA TDEELIAAMR AAHLDALLET LPEGLDTVVG DRGYRLSGGE KQRLAIARLL LKSPSVVVLD EATAHLDSES EAAVQQALAT ALHGRTSLVI AHRLATVREA DLILVLEDGR ILERGTHEEL LARGGLYTAL YRTQFAPQER ERRSTAN
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