| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2186 |
|---|
| Symbol | |
|---|
| ID | 3581402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2569472 |
|---|
| End bp | 2570695 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637685891 |
|---|
| Product | Sfr protein |
|---|
| Protein accession | YP_290242 |
|---|
| Protein GI | 72162585 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.117598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGA AGGCCCGTAT GTCGCTCCGC TTCGCGCAGG CCATGCGCCT GCCCGCACCG
CTGCCGCACG TCAGCCAGGT CGCCGCCCGG ATGCTGCCCC GCCACCTCGA CGGGGTGCTT
CTCGGAGCGG CGGTCACGCT CAGCATGGTG GGCGCCTTGC TGGTGTGGTC CGCCACCCTC
CCGCCCACCG GACATGCCGG TCCGACGGTC TACGCCTGGC GACACCTGGG GCACCTGCTG
CTGGCCCTGC CGCTCTGCCT CGCGCTCGCG TCGCTCACCC GGCGGGCACT CCGCGCCTAC
ACTCCGGTGC TCTTCGTGGC CGTCACCGTG GCGCTGCTGC TCGTCCTCGG GCCCCTGGGG
GAGACCGTCA ACGGGTCCCG CTCGTGGATC GCACTCGGCG ACTTGCGCGT CCAGCCCGCG
GAGACCGCCA AGATCGCGCT CATCCTGGCC GTCGCCGCGG TGCTGGGCCG GCCCCGGCCG
AGGACCCCAC GGCCCCCTGC CTCAGACGTG TTGATCAGCT TGGGGGTCGC AGCGGTACCG
ATCGGGCTGA TCCTGTTGCA ACCGGACCTG GGAAGCGCCC TGGTGCTGAC CGCGATCTAT
CTCGCTCTGC TCGCCTGCTC GGGGGCGCCG CTGCGCTGGC CGCTCGCCCT GCTCGGCTGC
GGCGCGTTCA CCGGTCTCGC GGTATGGCAG CTCGGCCTGC TCAAGGACTA CCAGGTAGCG
CGGTTCACGG CCTTCCTCGA CCCGCACGCG GACCCGCTGG GCGCCGGATA CAACGTCAAC
CAGGCGCTCA TCGCGGTCGG CTCGGGCGGC CTGAGCGGCT CCGGGCTCTT CCACGGCGGG
CAGACCAGCG GCAAGTTCGT CCCAGAACAG CACACCGACT TCGTCTTCAG TGTCGCAGCC
GAGGAACTCG GTTTCGCGGG GGGATGCGCG GTCATCGTCC TGCTCGGAGT CGTCCTCTTG
CGTATCCTGC GGGTCGCTTC CCGCTGTGAC GAGGTCCACG GCCGCTTGGT CTGCATCGGG
GTGGCGGCCT GGTTCTGTGT CCAAGTATTC GTCAACATCG GGATGACGCT GGGCCTCACC
CCGGTCACCG GGCTCCCACT GCCGTTCGTC TCCTATGGGG GGAGCGCAGC CGTCGCGAAC
TTCGCCGCGC TCGGCCTGGT CATGGCGGTC CACGCGCACA ACGAAGAGCG CCGTTCCCTG
GAACCGGCGG GCACGAGGGG CTGA
|
|---|
| Protein sequence | MIRKARMSLR FAQAMRLPAP LPHVSQVAAR MLPRHLDGVL LGAAVTLSMV GALLVWSATL
PPTGHAGPTV YAWRHLGHLL LALPLCLALA SLTRRALRAY TPVLFVAVTV ALLLVLGPLG
ETVNGSRSWI ALGDLRVQPA ETAKIALILA VAAVLGRPRP RTPRPPASDV LISLGVAAVP
IGLILLQPDL GSALVLTAIY LALLACSGAP LRWPLALLGC GAFTGLAVWQ LGLLKDYQVA
RFTAFLDPHA DPLGAGYNVN QALIAVGSGG LSGSGLFHGG QTSGKFVPEQ HTDFVFSVAA
EELGFAGGCA VIVLLGVVLL RILRVASRCD EVHGRLVCIG VAAWFCVQVF VNIGMTLGLT
PVTGLPLPFV SYGGSAAVAN FAALGLVMAV HAHNEERRSL EPAGTRG
|
|---|
| |