| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2090 |
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| Symbol | |
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| ID | 3579350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2451769 |
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| End bp | 2454213 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685786 |
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| Product | RelA/SpoT protein |
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| Protein accession | YP_290146 |
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| Protein GI | 72162489 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCG AAACGGTATC GACCCACACC AAACCGGTAC GCCCCGAGCC TCCCGCCCCC
GCCGCTGAGG TGCCTGCGGG GGCGTTTCCA CCAGGCCAGG AGCGCGACCA CGACACCCGT
CCGAGTGCCC CGCCCCGCGA CCAGTCCCCA CCGCCCGCCC CCGAAGCTGA CAGCCGCAGC
GCCGCCCGCC CAGCACCCCC CACCCATCCC GGAACGTCGT CCACAGTGTG GGTTCGACGT
AGGCTCGCCC GACTCGGCGC CCAACGGGGG ACGACTATGA ACCCGGTCCT CGAACCACTC
GTCAAAACCG TCCGCGCCAC CCACCCCAAA GCGGACATCC GGCTGATTGA GCGCGCCTAC
GACGTCGCTG CCCACTACCA CCGCAGCCAG AAACGCAAGA GCGGCGACCC CTACATCACC
CACCCCCTCG CCGTGGCCAC CATCCTCGCG GAACTCGGCA TGCAGGAGGC CACCATCGCC
GCGGGGCTGC TGCACGACAC GGTCGAGGAC ACCGAGTACA CCCTCGACCA GTTGCGCAGC
GACTTCGGGG ATGAGATCGC CGAACTTGTC GACGGGGTCA CCAAGCTCGA CAAGGTGAAG
TACGGCGAGG CCACCCAAGC CGAGACCGTC CGCAAGATGG TCGTAGCGAT GGCCCGCGAC
ATCCGCGTCC TGGTCATCAA ACTCTGCGAC CGCCTGCACA ACATGCGCAC CCTGCGCTAC
CTGCCGCAGG CCAAGCGGGA GAAGAAAGCA CGGGAGACCC TGGAAATCTA CGCGCCTCTG
GCCCACCGCC TGGGCATGAA CACCATCAAG TGGGAGCTGG AGGACCTCGC GTTCGCCACC
CTGTACCCCA AACGCTTCGA CGAGATCGCC CGCCTGGTCG CGGAACGCGC CCCCCGGCGC
GACGTCTACC TGCAGGAGGT CATTGAGATC GTCTCCGCCG ACCTGCGGGA AGCCAAAATC
AAAGCCACCG TGCGCGGTCG GCCCAAGCAC TACTACTCGA TCTACCAGAA GATGATCGCC
CGCAATGTCG GGTTCGACGA GATCTACGAC CTGGTCGGTA TCCGCGTCAT TGTGGACAGC
GTCCGCGACT GCTACGCGGC GCTCGGCATC ATTCACGCCC GCTGGAATCC GGTGCCGGGG
CGGTTCAAAG ACTACATCGC GATGCCGAAG TTCAACATGT ACCAGTCCTT GCACACCACC
GTGATCGGCC CGGAAGGCAG CCCGGTGGAA CTGCAGATCC GCACCCGCGC CATGCACCGG
CGCGCAGAAT ACGGCATCGC CGCGCACTGG AAGTACAAGG AGGAGCGCAA CAACGGCGGC
AAAGCCAAGG GCGCTTCCAC CGACATGGCC TGGCTGCGGC AGCTCATCGA CTGGCAGCAG
GAGACGAAGG ACCCCGGCGA GTTCCTGGAG TCGCTCCGCT TCGACCTGTC GGTGCAGGAA
GTCTTCGTCT TCACCCCCCG CGGGGACGTC ATCGCCCTGC CGCAGGGCGC CACCCCCGTC
GACTTCGCCT ACGCGGTGCA CACCGAGGTC GGCCACCGCA CGGTGGGGGC CCGCGTCAAC
GGCCGTCTGG TTCCCCTCGA CAGCGAGCTG CACAACGGGG AGACCGTGGA GATCATCACG
GCCAAGACCG ACGACGCCGG CCCGAGCCGC GACTGGCTGG ACTTCGTGAA AAGCGCTCGA
GCCCGCAACA AGATCCGGCA GTGGTTCACC AAGGAGCGCC GCGAAGCAGC GATCGAGCAG
GGCAAAGAGG CGATCGCCAA GGTCATGCGC AAGCAGGAGC TGCCGGTTCA GCGGCTGTTC
ACCAGCGAGT CGCTGATCGC ACTCGCCCAC GACCTGCGCT ACCGCGACCT GGACGCGCTG
TATGCGGCCG TCGGCGAAAA CCAGATCAGC GCCCACAAAG TCGTCGAGAA GCTCATCGAA
TCCGTGGGCT CGCTCGACAA CAACGAAGAG GACATCGCGG AAGCCACCAC CCCGATCCGG
GTGCCGCGGA AACGGCCCAC AGGCAACCCT GGAGTGGTCG TCCAAGGCGA TCCGGACGTG
TGGGTGCGCC TGTCCAAGTG CTGTACCCCC GTGCCCGGGG ACGCCATCAT CGGATTCGTT
ACCCGCGGGG CCGGGGTCTC AGTCCACCGC GACGACTGCG GCAACGTCAA ACACCTCGAC
CCCGACCGTC TCGTCCAGGT GGAATGGCAG CCCACGGGGA ACTCGATGTT CCTTGTCGCG
CTGCAGATCG AAGCGCTGGA CCGCACCCGC CTGCTGTCCG ACATCACCCG GGTGCTCTCC
GACCAGCACG TCAACATCCT GTCGGCGACC GTGCAGACCA CCCGCGACCG GGTCGCGCTG
AGCCGGTTCA CTTTCGAGAT GGCGGACCCC GCCCACCTGG GGCACGTCCT CAAAGCGGTG
CGGAGCGTGG ACGGCGTCTA CGACGTGTAT CGGGTCCGGA ACTAA
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| Protein sequence | MRSETVSTHT KPVRPEPPAP AAEVPAGAFP PGQERDHDTR PSAPPRDQSP PPAPEADSRS
AARPAPPTHP GTSSTVWVRR RLARLGAQRG TTMNPVLEPL VKTVRATHPK ADIRLIERAY
DVAAHYHRSQ KRKSGDPYIT HPLAVATILA ELGMQEATIA AGLLHDTVED TEYTLDQLRS
DFGDEIAELV DGVTKLDKVK YGEATQAETV RKMVVAMARD IRVLVIKLCD RLHNMRTLRY
LPQAKREKKA RETLEIYAPL AHRLGMNTIK WELEDLAFAT LYPKRFDEIA RLVAERAPRR
DVYLQEVIEI VSADLREAKI KATVRGRPKH YYSIYQKMIA RNVGFDEIYD LVGIRVIVDS
VRDCYAALGI IHARWNPVPG RFKDYIAMPK FNMYQSLHTT VIGPEGSPVE LQIRTRAMHR
RAEYGIAAHW KYKEERNNGG KAKGASTDMA WLRQLIDWQQ ETKDPGEFLE SLRFDLSVQE
VFVFTPRGDV IALPQGATPV DFAYAVHTEV GHRTVGARVN GRLVPLDSEL HNGETVEIIT
AKTDDAGPSR DWLDFVKSAR ARNKIRQWFT KERREAAIEQ GKEAIAKVMR KQELPVQRLF
TSESLIALAH DLRYRDLDAL YAAVGENQIS AHKVVEKLIE SVGSLDNNEE DIAEATTPIR
VPRKRPTGNP GVVVQGDPDV WVRLSKCCTP VPGDAIIGFV TRGAGVSVHR DDCGNVKHLD
PDRLVQVEWQ PTGNSMFLVA LQIEALDRTR LLSDITRVLS DQHVNILSAT VQTTRDRVAL
SRFTFEMADP AHLGHVLKAV RSVDGVYDVY RVRN
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