| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2083 |
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| Symbol | |
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| ID | 3579343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2442604 |
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| End bp | 2444622 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685779 |
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| Product | PAS/protein phosphatase 2C-like |
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| Protein accession | YP_290139 |
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| Protein GI | 72162482 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGGAT CGACCGGCAC AACGGACGGC TTCGCCGGTT CTGGAGGAAA GACTGACGCC
CTCGTAGCAG GGATGAGTGA TCCGGCGGGC ACGGCCTTCC AGTACGCGCC GACCGCGATG
CTTGTGGCTG ACCCGGCCGG AGCGGTCCTC GCGGTCAACG ACACTTTCAC TGCTCTCCTC
GGGCGCCCGT CCACAGAGAT CGCGGGACGT CCTTGGCCCG AACTGTTCAC CCCTGACGAC
CACGGCCGAG CCTGGGAGCA GCACAACAAG GCACTGCGGG GCGCCGCCCC CCGACAGTGG
CCCGACCTGA CGATCCGCAC CGCCGACGGG CTGTCCCGGC GCACCATCGT CCAAGCCCGG
TCTTTCCCCG CCGCACCGGG CGGCGAAACC GCGGGCGTCG TCATTCAGCT CTCGCTGCTC
AGCCACGACG AAGAGACCCT GCGCATCGTG ACCGAGCTGC GGCTCAGGGA AGCGAACACC
GCCCTGTGGT CCCTTGACCT CACCAGCGGC ACGCTGAGCG AACTGTTCGG TCCCTCCCCG
CTGGCCCGCA TGCTCGCCGG GGACGCCTGC ACCCTGGAAG AATGCCTCGC CCGAGTGCAC
CGGGACGACG TCTCCCGGCT ACGCGCCGCA CTGGAAACCG CCTACCAGGG CGGCAACTAC
GAGCAGCGGT TCCGCATGTT CGACCAGGTA GGAGACGAGC GATGGCTGTA CGCGCGCGCC
ACCTACCTCG GGGGAGACCG GCCCCGACTG GTCGGCATCG TCGACGATAT GACCGAGCAC
GTGCAGCTCG TACGCCGCTT GGCGGACCGC CGCCGCATCG AAGCAGCCCA GGGCCGTCAA
GTCAACGAAC TCGCCGCCAA ATTGGTCTCC GCCACCACGG TGCAGGAGGT CACCAACCTG
CTCAGCAGGG AGTTCACGCC TATTTTCGGC GGTGACGGCG CCCACGTCGT GCTGCTCGAC
GACACCGAGC TCCGCCTCTA CCCGGAGAGC ACGGCAAGCA CCGGGCAGTG GCTCTACCCC
GACAACCACC GGGATTCCGC CCACCCTGTC GGGGCAGTCC TCCACGACAG CCAGCCGCGC
TTCTTCGAAA GCCGCTCCGA ACTCTTGGAG CGGTTCCCCG CCCTAGGAGA GGCGCTCTGC
CAGACTGACG ACCACTCGTG GGCTTTCGTC CCGATGTTCG GGGACGGCAA AACCGCCATC
GGCGTGTGGG TCGTGGCCTG GACCCAGCCC CACCACGCTA CTCCGGACGA ACGCGCCCTC
CTGCTGACCT TGGCCGGACT CGCCGGGCAG GCCCTGCAAC GCGTCAACCG CCAAAGCGCG
GAACTGGAGC TGGCCGACGC CGTCCAACGG AGGATGCTGC CCCCGCAGCC CCCCGCCTTC
TCCGAACTGG ACGTGGCCGT GCGCTACCTT CCCGCCCGAG CTGGCTGGCG GGTCTGCGGC
GACTTCTACG ACGCCATCCG GCTTCCCGGG CGGCGGATCG GCCTGGTGGT CGGAGACGTC
CAAGGCCACG GGGTGGAGGC TGCTGCCGCT ATGGGACAGA TCCGCATGGC GTTCCGCGCC
TACGCCACCA ACCAGAGCGA TCCGGGAACC GTGCTCACCG AAACCAATCG GCTCCTCACC
GAAACCGGGG AGATCGTCTT TGCGACCTGC GGCTACCTGG TAATCGACAT TGACCTGGGA
CAGCTGCAGG CCGCCTGGGC CGGGCAGCCT CCCGTCGTGC TCGCCACCGA GTCAGGCTTC
GAAGTGTGGG AGCCCGAGAC CGGACCGCCC GTCGGGGTGG ACGCGGAAGC GAAATACCCG
GTGAGCTCCC GCCCGCTCCC TCCGGGAAGC ACCTTGCTGA TGTGCTCGGA CGGGCTGGTG
GAGAGCGCCG AAGTGAACAT GGACGACGGC CTGGCCGCGG TAGGCAGCGA ACTCAGCGCC
AAAGTCACCG ACGTCCACGG TGCGGCGACC GCGCTCGCAG AGCTCGCCCC CGCGGGACGC
GGCGACGACA TCGCTATCCT CGTCGCCCGG GTCCGCTGA
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| Protein sequence | MNGSTGTTDG FAGSGGKTDA LVAGMSDPAG TAFQYAPTAM LVADPAGAVL AVNDTFTALL
GRPSTEIAGR PWPELFTPDD HGRAWEQHNK ALRGAAPRQW PDLTIRTADG LSRRTIVQAR
SFPAAPGGET AGVVIQLSLL SHDEETLRIV TELRLREANT ALWSLDLTSG TLSELFGPSP
LARMLAGDAC TLEECLARVH RDDVSRLRAA LETAYQGGNY EQRFRMFDQV GDERWLYARA
TYLGGDRPRL VGIVDDMTEH VQLVRRLADR RRIEAAQGRQ VNELAAKLVS ATTVQEVTNL
LSREFTPIFG GDGAHVVLLD DTELRLYPES TASTGQWLYP DNHRDSAHPV GAVLHDSQPR
FFESRSELLE RFPALGEALC QTDDHSWAFV PMFGDGKTAI GVWVVAWTQP HHATPDERAL
LLTLAGLAGQ ALQRVNRQSA ELELADAVQR RMLPPQPPAF SELDVAVRYL PARAGWRVCG
DFYDAIRLPG RRIGLVVGDV QGHGVEAAAA MGQIRMAFRA YATNQSDPGT VLTETNRLLT
ETGEIVFATC GYLVIDIDLG QLQAAWAGQP PVVLATESGF EVWEPETGPP VGVDAEAKYP
VSSRPLPPGS TLLMCSDGLV ESAEVNMDDG LAAVGSELSA KVTDVHGAAT ALAELAPAGR
GDDIAILVAR VR
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