| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2024 |
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| Symbol | uvrA |
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| ID | 3580897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2365792 |
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| End bp | 2368629 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685717 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_290080 |
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| Protein GI | 72162423 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.136428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATC GTCTGGTGAT CCGCGGGGCC CGCGAACACA ACTTGAAGAA CGTCTCCCTG
GAACTGCCCC GCGACTCGAT GATCGTGTTT ACCGGGCTGT CCGGTTCAGG GAAGTCGTCG
CTGGCCTTCG ACACGATCTT CGCTGAGGGG CAGCGCAGGT ACGTGGAGTC GCTCTCCGCG
TACGCCCGCC AGTTCCTCGG CCAGATGGAC AAGCCCGCCG TCGACTTCAT CGAGGGCCTG
TCTCCCGCGG TTTCCATCGA CCAGAAGTCC ACGAGCCGCA ACCCGCGCTC TACGGTCGGC
ACCATCACGG AGGTGTACGA CTACCTGCGG CTGCTGTGGG CGCGGATCGG AAAGCCGCAC
TGTCCCCGCT GCGGCCGCCA GATCGCCCCG CAGACCCCGC AGCAGATCGT GGACCGGGTG
TTGGAACTGC CGGAGGGCAC CCGTTTCCAA GTGCTGGCGC CCGTGGTGCG GGGGCGGAAA
GGCGAGTACA CGGAACTGTT CCAGAGCCTG CAGGCCAAAG GGTTCACCCG GGCGCGGGTC
GACGGTGTGC TCGTGCGGTT GGACGAGGCG CCGGAGCTCA AACGGTACGA GACTCACGAC
ATCGCTGTCG TGGTGGACCG GCTCAGCGTC AAACCCACGG CGAGTCAACG GCTGGCCGAC
TCGGTGGAGA CCGCGCTGCA GTTGGCGGGC GGCACCATCA TCGTGGAGTT CGTGGACCTG
CCCGAGGACG ATCCCGGGCG GGAGCGGATC TACTCTGAGC ACCTGTACTG CCCCTACGAC
GACCTGTCGT TCGAAGAGCT TGAGCCGCGG TCCTTCTCCT TCAACTCGCC GTACGGGGCC
TGCCCGGAAT GCACCGGGCT GGGCACCCGA CTGGAGGTCG ACGCGGAACT GGTCGTCCCC
GACCCCACGA AGACCCTTGC TGAAGGCGCG ATCGCTCCGT GGAGCAGCGG CAGCCCCAGC
GACTACTTCC TCCGCCTCAT GCAGGCGTTG GGTGAGGCCA TGGGGTTCGA CTTGGACACC
CCGTGGGAGA AGCTGCCGCG CAAAGCACGC CAGGCCCTGC TCACCGGTTA CGACACCCAG
GTCCACGTCA GCTACCGCAA CCGGTACGGG CGGCGGCGCG CCTACTACAC CGATTTCGAG
GGAGTCGTCA ACTGGATCCG CCGCCGCCAC GCGGAGAGCG ACAGCGAGCT CGTGCGGGAG
CGGCTTGAAG GCTACATGCG GGTCGTGCCG TGCCCCGCAT GCCAGGGCAG CAGGCTCAAA
CCGGAAGCCC TCGCGGTGAC CGTCGGCGGC AAGTCCATCG CCGAGGTCAG CGCGATGCCG
CTGGGGGAGT GCGCGGACTT CTTCGCGTCG CTGGAACTGT CCGACCGCGA CCGGACGATC
GCCGCCCAAG TCCTCAAGGA GATCAACGCC CGGCTCGGCT TCCTTCTCGA CGTGGGCCTG
GACTATCTCA CCCTCAGCCG GGCCGCAGCC ACCCTGTCTG GTGGGGAGGC CCAGCGGATC
CGGCTGGCCA CCCAGATCGG CTCCGGGCTG GTCGGGGTGC TCTACGTCCT CGACGAGCCG
TCGATCGGAC TGCACCAGCG GGACAACTTC CGGCTGTTGG AGACGTTGCA GCGGCTGCGG
GACCTCGGCA ACACGCTCAT CGTCGTCGAG CACGACGAGG ACACGATCCG CGTCGCGGAC
TGGGTGGTCG ACATCGGCCC GGGCGCCGGG GAGCACGGCG GCCAGGTCGT CGTGTCCGGG
ACCGTGAAGG AACTGCTGGA GCACCCCGAG TCGATCACGG GACAGTACCT GTCGGGGCGG
CGGACGATCC CGGTGCCTGA GAAGCGGCGG CCCCGCGATC CCAAGCGGCA GCTCGTCGTC
AAAGGCGCCC GCGAGAACAA TCTGCGCGAT ATCGACGTCG CGTTCCCGCT GGGGGTGTTC
ACTGCCGTCA CCGGGGTGTC CGGGTCGGGC AAGTCCACCC TGGTCAACGA GATCCTGTAC
AAGGCGCTGG CCAAGGAGCT GCACGGGGCG CGCGACGTGC CCGGGCGGCA CACGCGGATC
AACGGGGTGC ACCTGGTGGA CAAGGTCGTC CACGTCGATC AGAGCCCGAT CGGCCGGACC
CCGCGGTCGA ACCCGGCAAC CTACACCGGG GTGTTCGACC ACATCCGCAA ACTGTTCGCG
CAGACGACAG AAGCGAAGGT CCGCGGCTAC CAGCCGGGCC GGTTCTCCTT CAACGTCAAG
GGGGGCCGCT GCGAAGCGTG CGCGGGCGAC GGCACGATCA AGATCGAAAT GCAGTTCCTC
CCGGACGTCT ACGTGCCGTG CGAGGTCTGC CACGGCGCCC GGTACAACCG CGAGACGCTC
GACGTGCACT ACAAGGGCAA GAACATCGCG GACGTGCTGG ATATGCCGAT CACTGAGGCG
CTGGAGTTCT TCGAGTCGAT CAGCGCGATC CGCCGCCACT TGCAGACCTT GCACGACGTG
GGGTTGGGCT ATGTGCGGCT CGGACAGCCT GCCACCACCC TGTCGGGCGG GGAGGCCCAG
CGGGTGAAGC TCGCCACCGA GCTGCAGCGC CGCTCTACCG GGCGCACCGT GTACATCCTG
GACGAACCGA CCACGGGACT GCACTTCGCT GACATCGAGA AACTGTTGAA CGTGCTGGGA
CGGCTCGTGG ATGCGGGCAA CACCGTCATC GTGATCGAGC ACAACCTCGA CGTCATCAAG
ACCGCCGACT ACCTCATTGA CATGGGGCCG GAAGGCGGGT CGCGCGGCGG CACGGTGGTG
GTGACAGGAA CCCCGGAAGA GGTTGCCCAG CATCCGGAGA GCCACACCGG CCACTTCCTC
CGCGCGATTC TCCGCTGA
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| Protein sequence | MADRLVIRGA REHNLKNVSL ELPRDSMIVF TGLSGSGKSS LAFDTIFAEG QRRYVESLSA
YARQFLGQMD KPAVDFIEGL SPAVSIDQKS TSRNPRSTVG TITEVYDYLR LLWARIGKPH
CPRCGRQIAP QTPQQIVDRV LELPEGTRFQ VLAPVVRGRK GEYTELFQSL QAKGFTRARV
DGVLVRLDEA PELKRYETHD IAVVVDRLSV KPTASQRLAD SVETALQLAG GTIIVEFVDL
PEDDPGRERI YSEHLYCPYD DLSFEELEPR SFSFNSPYGA CPECTGLGTR LEVDAELVVP
DPTKTLAEGA IAPWSSGSPS DYFLRLMQAL GEAMGFDLDT PWEKLPRKAR QALLTGYDTQ
VHVSYRNRYG RRRAYYTDFE GVVNWIRRRH AESDSELVRE RLEGYMRVVP CPACQGSRLK
PEALAVTVGG KSIAEVSAMP LGECADFFAS LELSDRDRTI AAQVLKEINA RLGFLLDVGL
DYLTLSRAAA TLSGGEAQRI RLATQIGSGL VGVLYVLDEP SIGLHQRDNF RLLETLQRLR
DLGNTLIVVE HDEDTIRVAD WVVDIGPGAG EHGGQVVVSG TVKELLEHPE SITGQYLSGR
RTIPVPEKRR PRDPKRQLVV KGARENNLRD IDVAFPLGVF TAVTGVSGSG KSTLVNEILY
KALAKELHGA RDVPGRHTRI NGVHLVDKVV HVDQSPIGRT PRSNPATYTG VFDHIRKLFA
QTTEAKVRGY QPGRFSFNVK GGRCEACAGD GTIKIEMQFL PDVYVPCEVC HGARYNRETL
DVHYKGKNIA DVLDMPITEA LEFFESISAI RRHLQTLHDV GLGYVRLGQP ATTLSGGEAQ
RVKLATELQR RSTGRTVYIL DEPTTGLHFA DIEKLLNVLG RLVDAGNTVI VIEHNLDVIK
TADYLIDMGP EGGSRGGTVV VTGTPEEVAQ HPESHTGHFL RAILR
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