| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2022 |
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| Symbol | |
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| ID | 3580895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2363889 |
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| End bp | 2365028 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685715 |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | YP_290078 |
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| Protein GI | 72162421 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTCG GCAACTGGGT TGCAGTAGGC ATCGCCGTCG CCATCTCCGT GTTCCTGGTC
ACGGTGCTGC ACTGGTTACT GACCCACCAG CTCTCCAGAG TGTGGGCCAT GGCCGAGCAC
CTGGTGCGAC GCTGCCGATA CTCCGCGTAC GCGGCGGCTA TCGTCATCGG GATCAACCTG
GCGATCCCCG ACGCGCGAGG GTTTGAGAAC CCCAAGTTCT GGTATCCGAT CTTCCAGCAC
GGCATGCGCA TCGCGATGAT CGCGTCGCTG ACGTGGCTGG GGCTGACCAT GGCCTACGCG
GTCACCGACA TGATCCTGGC GCGCCTGTCG GCGCGCAACG GCGACGCTGA CCGCCGCTCC
CGCCGCCTGC AGACCCAGGT GCGGCTCCTG CGGCGGGTGG TGGCCACCGT GCTGGGCCTG
CTCGCCGTCG CAGCGATCCT GTTCACCTTC CCCGCGGTCG CCGCACTCGG TGCCGGTATT
CTGGCGTCCG CCGGTCTGAT CGGCATCATC GCCGGTGTGG CCGCTCAGGC CACGCTGGGC
AACATGTTCG CCGGACTGCA ACTGGCCTTC AGCGACTCGC TGCGCATCAA CGACGTGGTC
GTTGTAGAAG GCGAATGGGG CCGGGTCGAA GAACTGACGC TCACCAACGT GACCGTGCGC
ATCTGGGACG AGCGCCGACT GATCTTCCCC GTGTCCTACT TCACCACGCA ACCCTTCGAA
AACTGGACCA AGCACGGCAG CAACATCACG GGCGTGGTGA TGTTCCGAGT CGACTGGGAG
GTCCCAGTGG ACCGGCTCCG CGCCGAAGTG GAGTCGTTTG TGACCAACCA CCCCCAGTGG
GACGGTCGCA GTTGGTCGCT CGACGTCACC GACATCCTCG ACTCGGGTCT GGTGGAGCTC
CGCGCCACAG TGACCGCCGC CGACTCCAGC GCCCGGTGGA CCCTCATGGT GCAGTTGCGT
GAGCACATGC TCACCTACAT CCGGGAGAAC TTCCCTGAAG CCCTTCCGCG CAACCGCACC
CAATTCACGG GCATGGACGG CGAAGACCAG CGTTACCCCG CGGTGGTGCC CACTGGAGCG
CCCCGCCAGC CTTCCGCCGC CCCCGCCTCG GACGACACTG CACGCACCAA GACCGACTAA
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| Protein sequence | MSLGNWVAVG IAVAISVFLV TVLHWLLTHQ LSRVWAMAEH LVRRCRYSAY AAAIVIGINL
AIPDARGFEN PKFWYPIFQH GMRIAMIASL TWLGLTMAYA VTDMILARLS ARNGDADRRS
RRLQTQVRLL RRVVATVLGL LAVAAILFTF PAVAALGAGI LASAGLIGII AGVAAQATLG
NMFAGLQLAF SDSLRINDVV VVEGEWGRVE ELTLTNVTVR IWDERRLIFP VSYFTTQPFE
NWTKHGSNIT GVVMFRVDWE VPVDRLRAEV ESFVTNHPQW DGRSWSLDVT DILDSGLVEL
RATVTAADSS ARWTLMVQLR EHMLTYIREN FPEALPRNRT QFTGMDGEDQ RYPAVVPTGA
PRQPSAAPAS DDTARTKTD
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