Gene Tfu_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2019 
Symbol 
ID3580892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2359532 
End bp2360524 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content69% 
IMG OID637685712 
Producthypothetical protein 
Protein accessionYP_290075 
Protein GI72162418 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTT ACGAGGACGC TTGGGAGAAG CCGCACAGTG AGCACGACGC TGCCGAACCG 
CCGCGCGTGG TTGCGCTCGG CGGAGGGCAC GGACTGTACG CGTCGTTATC CGCGTTACGC
CGGGTCACCA CTGACGTCAC CGCGATCGTC ACGGTTGCTG ACGACGGGGG GTCCAGTGGG
CGGCTGCGCC GCGAGCTGGG GGTGCTGCCT CCCGGGGACC TGCGGATGGC GCTGGCTGCG
CTGTGCGGTG ACGACGAGTG GGGCAGCACC TGGAGTGAAG TCGTGCAGCA CCGGTTCCGA
TCCGAGGGTG AACTGCACGG CCACGCGGTA GGCAACCTGC TCATCGTCGC GCTGTGGGAA
CTGTTGGGTG ACTCGGTGGC CGCCTTGGAC TGGGTGGGCC AGTTGCTGGG CGCGCACGGC
CGGGTGCTGC CCATGTCGTC GGTGCCGTTG GACATCGTCG CCGAAGTGGA GGGCGCCGAC
CCGGAGCGCC CGGACGAGGT GGTGACGGTG CGCGGGCAGG TGGCCTGTGC CAGTACTCGG
GGACGAGTGC GGTCGATTTC GCTGATTCCG GAGCGGCCGC CGGTGCCGAG CCAGGTGATC
CGGGCTGTGC ACGAGGCCGA CTGGGTGGTG TTCGGTCCGG GGTCGTGGTT CACCAGCGTG
CTTCCGCACC TGCTCGTGCC GGATTTGGCG CGGGCGCTGG TGACGACGAA GGCCCGGCGC
CTTGTGGCGC TCAACTTGTC TCCGCAACGG GGAGAGACGG ACGGGTTTGC CGCGCACACC
TACCTGGAGG TGCTTGCCGA CCACGCCCCT GACTTGCGGG TGGACGTGGT GCTGGCGGAC
CGCAAAGGGG TGGAGGACAC GGTGCGGCTG GAGCAGGTCT CCGCGGAACT GGGCGCCCGG
CTGGTGGTGG CCGACCTGGC GGTCGACGAC GGCTCACCGC GGCATGATCC GGATCGGTTC
GCAGCGGCGT TCGATCAGAT CTTCGCCAGC TAA
 
Protein sequence
MAGYEDAWEK PHSEHDAAEP PRVVALGGGH GLYASLSALR RVTTDVTAIV TVADDGGSSG 
RLRRELGVLP PGDLRMALAA LCGDDEWGST WSEVVQHRFR SEGELHGHAV GNLLIVALWE
LLGDSVAALD WVGQLLGAHG RVLPMSSVPL DIVAEVEGAD PERPDEVVTV RGQVACASTR
GRVRSISLIP ERPPVPSQVI RAVHEADWVV FGPGSWFTSV LPHLLVPDLA RALVTTKARR
LVALNLSPQR GETDGFAAHT YLEVLADHAP DLRVDVVLAD RKGVEDTVRL EQVSAELGAR
LVVADLAVDD GSPRHDPDRF AAAFDQIFAS