| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2003 |
|---|
| Symbol | |
|---|
| ID | 3580740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2339326 |
|---|
| End bp | 2340432 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685696 |
|---|
| Product | transaldolase |
|---|
| Protein accession | YP_290059 |
|---|
| Protein GI | 72162402 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCC CACTTCAGCA GCTCTCTGAC GCGGGCGTAG CCGTCTGGCT GGACGACATC
AGCAGGCAGC GGCTGCGCAG CGGCAACCTG GCCGAGTTGA TCGCCCAACG CAACGTCGTG
GGAGTCACCT CCAATCCCAC GATCTTCGCC AAGGCGCTGG CGGAGGGCGA CGCCTACGAC
GGCCAGTTGC GCGACCTGGC CGTGCGCGGC GTGTCAGTGG AAGAAGCGGT ACGCCTCATC
ACCGCGTACG ACATCCGTTG GGCTGCGGAT GTGCTGCGCC CGGTCTACGA GGCCACCGAC
GGCGTGGACG GGCGGGTGTC GCTGGAGGTC GACCCGCGGC TGGCCCGCGA CACGGAGCGG
ACTGTCGCCG AAGCCCGCGC CTTGTGGTGG CTGGTGGACC GGCCCAACCT GATGATCAAG
ATCCCCGCGA CCGTCGAGGG ACTGCCGGCG ATCACCGCGG CGCTCGCCGA AGGCATCAGC
GTCAACGTGA CCCTGATCTT CTCGCTGGAG CGCTACCGGG CGGTCATGGA CGCGTTCCTC
GCCGGTCTGG AGCAGGCCCA GCAGGCCGGC CGTGACCTGT CGACGATCCA CTCGGTGGCG
TCGTTCTTCG TCAGCCGGGT GGACACCGAG GTGGACAAAC GGCTGTCGAA GATCGCCACG
GAGGAGGCGG TGGCGCTCCG CGGCAAGACC GCGCTGGCCA ACGCCCGCCT GGCCTACGCC
GCCTACGAAG AGGTGTTCTC GTCTGCCCGG TGGACCGCCC TCGCCCAGGC CGGGGCGCGC
CCGCAGCGTC CGCTGTGGGC GTCGACCGGG GTGAAGGACC CGGAGCTGCC GGACACGCTG
TATGTGACCG AACTGGTCGC CCCGGGCACG GTGAACACGA TGCCGCAGGC CACGCTGGAC
GCGGTCGCCG ACCACGGCAC GATCACCGGG GACACGGTGC GCGGACACTA CGACGCGGCT
CGGGCCCACC TGGATGCGGT GGAGTCGGTC GGCGTGTCCA TGTCCGACGT GGTGGAGACC
TTGGAGGACG AGGGCGTCGA CAAGTTCGTG AAGTCCTGGG AAGAACTGCT GGACCGCGTC
GCCCAGCAGC TTGCCGCCCA CACGTGA
|
|---|
| Protein sequence | MGSPLQQLSD AGVAVWLDDI SRQRLRSGNL AELIAQRNVV GVTSNPTIFA KALAEGDAYD
GQLRDLAVRG VSVEEAVRLI TAYDIRWAAD VLRPVYEATD GVDGRVSLEV DPRLARDTER
TVAEARALWW LVDRPNLMIK IPATVEGLPA ITAALAEGIS VNVTLIFSLE RYRAVMDAFL
AGLEQAQQAG RDLSTIHSVA SFFVSRVDTE VDKRLSKIAT EEAVALRGKT ALANARLAYA
AYEEVFSSAR WTALAQAGAR PQRPLWASTG VKDPELPDTL YVTELVAPGT VNTMPQATLD
AVADHGTITG DTVRGHYDAA RAHLDAVESV GVSMSDVVET LEDEGVDKFV KSWEELLDRV
AQQLAAHT
|
|---|
| |