| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2002 |
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| Symbol | |
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| ID | 3580739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2337142 |
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| End bp | 2339265 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685695 |
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| Product | transketolase |
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| Protein accession | YP_290058 |
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| Protein GI | 72162401 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.90383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACACCG GCACCCCAAA GACCCTGGAC TGGTCTGATC TCGATAGACG TACCGTAGAC
GTGGTTCGTG CCCTGGCGAT GGACGCGGTC GAAGAAGCGG GATCCGGGCA CCCTGGAACC
GCGATGAGTC TGGCGCCTGT GGCCTACCTG CTCTTCCAGA AGGTGATGCG GCACGATCCG
ACAGATCCGA AGTGGATCGG CCGCGACCGC TTCGTCCTGT CCTGCGGGCA CTCCAGCCTC
ACGCTCTACA TCCAGCTCTA CCTGGCTGGC TACGGGCTGA GCCTGAACGA CATCAAGCGG
CTGCGCCAGT GGGGCAGCCT CACCCCGGGC CACCCCGAAT ACGGGCACAC CGCCGGGGTG
GAAACCACCA CCGGCCCCTT GGGGCAGGGC ATCGGCAACG CGGTCGGCAT GGCCATGGCC
GCCCGCCGGG AGCGGGGCCT GTTCGACCCG GACACCCCGA TCGGGGAAAG CCCGTTCGAC
CACTACATCT ACGTCCTGTG CTCTGACGGC GACGTCCAGG AGGGCATCAG CCACGAAGTA
AGTGCCCTCG CCGGCACGCA GAAGCTCGGC AACCTCATCG TCATCTGGGA CGACAACCGC
ATCTCCATCG AAGACGACAC CCAGATCGCA TTCACCGAAG ACGTCGTCGC CCGCTACGCC
GCCTACGGCT GGCACGTCCA AGAGGTCGAG TGGGTCGGCG AGGACGGCTC CTACCACGAA
GACGTGGCGG CGCTGTACGA CGCGATCCGG GCCGCCCAGG CGGAGACGGA ACGTCCCTCT
TTCATCCGGC TGCGCACCAT CATCGGCTGG CCGTCCCCGA ACAAGCAGAA CACGGGGGCG
ATCCACGGCG CCGCGCTGGG GGCTGAAGAG GTCGCCGCCA CCAAGCGGGT GCTGGGCCTC
AACCCTGAGG CGCAGTTCGA CGTGCCCAAC GAGCTGCTGG AGCACGCCCG GGGCGTGGTG
GCGCGGGGCC GCGCCGCCCG CCAGGAATGG GAGGCCTTGT TCGCCAAGTG GCGGGCCAAC
GCGGGCGAGC GTGCCGAACT GTTCGACCGG CTGATGGCAG GCTCGCTCCC GGACGGTTGG
GAGAAGGCGA TCCCGACCTT CGAGCCCAGC GCTAAGGGCA TGGCCACCCG GAAAGCGTCC
GGTGAGGTGC TGAGCGCGAT CGCCCCGGTG CTGCCGGAGC TGTGGGGCGG CTCGGCGGAC
TTGGCCGGAT CCAACAACAC CACGCCTAAG GGCGAGCCGT CGTTCATCCC CGAGGAGCGG
TCCACGAAGG CGTTCTCCGG CCACCGCTAC GGCCGGGTGC TGCACTTCGG GATCCGTGAA
CACGGCATGG GGGCGATCCT CAACGGGATC GCGCTGCACG GCCCCACCCG CCCCTACGGT
GGCACCTTCC TCGTGTTCAG CGACTACATG CGGCCGTCGG TGCGGCTGGC TGCCCTGATG
AAGCTGCCGG TCACGTACGT GTGGACCCAC GACTCGATCG GTCTGGGCGA AGACGGACCC
ACCCACCAGC CGGTGGAGCA CCTGTGGTCG CTGCGCGCCA TCCCCGGCCT GGCGGTGGTG
CGTCCCGCCG ACGCCAACGA GACGGCAGTG GCCTGGCGCA CCATCCTGGA ACGCAATGAC
GGCCCGGTGG CGCTCGCGCT GACCCGGCAG TCGGTTCCGG TTCTGGACCG CTCCGAGCTC
GCCTCTGCGG AGCTGGTCTC CCGCGGCGGG TACATCCTGG CCGAAGCCAG CAACGGCCGT
CCGGAGGCGA TCATCATCGC CACCGGAAGT GAGGTGCAGA TCGCGTTGGA GGCGCGTTCC
CGCCTGGAGG AGTCGGGTAC TCCTACCCGT GTGGTGTCGA TGCCGTGCCT GGAGTGGTTC
AACGAGCAGG ACGACGCCTA CCGCCAGCAG GTGCTTCCAC CGTCGGTCCG GGTCCGGGTC
TCCGTGGAAG CCGGGGTCGC CTTGGGCTGG CGCGAGCTGG TGGGCGAGTA TGGCGAGTCG
GTGAGTCTGG AACACTTCGG CGCTTCGGCT CCGTACGCGA CTCTCTACGA GCAGTTCGGG
CTCACCGCCG ACCGGGTAGT GGCAGCCGTA CACTCCAGCG CTGCCAAGCT CGGCGGTGAC
CGTGGATCAA CGACCGGCAA CTGA
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| Protein sequence | MNTGTPKTLD WSDLDRRTVD VVRALAMDAV EEAGSGHPGT AMSLAPVAYL LFQKVMRHDP
TDPKWIGRDR FVLSCGHSSL TLYIQLYLAG YGLSLNDIKR LRQWGSLTPG HPEYGHTAGV
ETTTGPLGQG IGNAVGMAMA ARRERGLFDP DTPIGESPFD HYIYVLCSDG DVQEGISHEV
SALAGTQKLG NLIVIWDDNR ISIEDDTQIA FTEDVVARYA AYGWHVQEVE WVGEDGSYHE
DVAALYDAIR AAQAETERPS FIRLRTIIGW PSPNKQNTGA IHGAALGAEE VAATKRVLGL
NPEAQFDVPN ELLEHARGVV ARGRAARQEW EALFAKWRAN AGERAELFDR LMAGSLPDGW
EKAIPTFEPS AKGMATRKAS GEVLSAIAPV LPELWGGSAD LAGSNNTTPK GEPSFIPEER
STKAFSGHRY GRVLHFGIRE HGMGAILNGI ALHGPTRPYG GTFLVFSDYM RPSVRLAALM
KLPVTYVWTH DSIGLGEDGP THQPVEHLWS LRAIPGLAVV RPADANETAV AWRTILERND
GPVALALTRQ SVPVLDRSEL ASAELVSRGG YILAEASNGR PEAIIIATGS EVQIALEARS
RLEESGTPTR VVSMPCLEWF NEQDDAYRQQ VLPPSVRVRV SVEAGVALGW RELVGEYGES
VSLEHFGASA PYATLYEQFG LTADRVVAAV HSSAAKLGGD RGSTTGN
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