| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2001 |
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| Symbol | |
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| ID | 3580738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2335610 |
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| End bp | 2336587 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685694 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_290057 |
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| Protein GI | 72162400 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0149749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCC TCGGTCGTCC CGCTGCCACC GATACCTGCG CGGCCGCTGA TTCTCCCACT
GGGGGTGTGT CGCGCTCCGC TTCGCTGGGG ACCTACATCC GCGCCTATAT CGCCCTGTCG
AAGCCGCGGG TCATTGAACT GCTGCTGATC ACCACTATCC CGGTGATGTT CGTGGCAGCC
CAGGGCGTGC CGCCGCTGGG GATCGCCGTG GCCACCCTGG TGTTCGGCAC CATGTCCGCG
GCCAGTGCCA ACGCCATCAA CTGCTACATC GACCGGGACA TCGACCGTGC TATGCGGCGT
ACCCGCCGCA GACCCACCGC CATGGAGCAG GTGACGCCGC GCGGCACGAT GATCTACGGG
ATTACGCTGG CGGTCCTGTC CACGGTCGGC TTCGTGGTGT TCGTGAACTG GCTGGCCGCG
GCGTTGTCGG TGTTCGCGAT CGCGTTCTAC ATCTTCGTCT ACACACTGCT GCTCAAGCGG
CGCACCGCGC AGAACGTGGT GTGGGGCGGG ATCGCCGGCT GCATGCCCGT GCTCATCGGC
TGGGCGGCGA TCACCGAGCG CCTCGACTGG GCCCCGTTCA TCCTGTTCCT GGTGGTGTTC
TTCTGGACAC CGCCGCACAC GTGGGCATTG GCCATGCGGT ACCGCGAGGA CTACGCCGCC
GCGAACGTCC CCATGCTCCC GGTGGTGGCT AGCGACCGCC GGGTGATGCT GGAGTGCGTG
CTGTACTCGT GGGCCACCGT GGTGGTGTCG CTGCTGCTGT GGCCTATCGC CGATACCACG
CTGCTGTACC CGGTGGCGGC CGCCGTGCTG GGGGTGATCC TGCTCGCCCA GGCGCACCGC
CTCTACAACC AGGTCCGTGC CGGAGTGAGC GGCAGCAAGC TCAAGACCAT GGGCTTCTTC
CACCTGTCGA ACGCCTACCT GGCCCTGCTG TTCGTGGCGG TGACGATCGA CCCGCTCCTG
GCTAACGCAC TGCGCTGA
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| Protein sequence | MTLLGRPAAT DTCAAADSPT GGVSRSASLG TYIRAYIALS KPRVIELLLI TTIPVMFVAA
QGVPPLGIAV ATLVFGTMSA ASANAINCYI DRDIDRAMRR TRRRPTAMEQ VTPRGTMIYG
ITLAVLSTVG FVVFVNWLAA ALSVFAIAFY IFVYTLLLKR RTAQNVVWGG IAGCMPVLIG
WAAITERLDW APFILFLVVF FWTPPHTWAL AMRYREDYAA ANVPMLPVVA SDRRVMLECV
LYSWATVVVS LLLWPIADTT LLYPVAAAVL GVILLAQAHR LYNQVRAGVS GSKLKTMGFF
HLSNAYLALL FVAVTIDPLL ANALR
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