Gene Tfu_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2000 
Symbol 
ID3580737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2334872 
End bp2335495 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID637685693 
Producthypothetical protein 
Protein accessionYP_290056 
Protein GI72162399 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0173133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAGA TCACCCGCTG GGAAGCCATG GTGCAGCAGA ATCCCGGCCA TTCCCGGTGG 
TATGTGGAGC GTTTCCGCAC CATGGCCGCG CAGGGGAACG ACCTTGCGGG CGAGGCTCGC 
ATGATCGACG CGATGGTGGG GCGCGGTTCC CGGATTCTGG ACGCGGGCTG CGGGCCGGGA 
CGGGTCGGCG GGGAACTCGC TGCACGCGGC CACCACGTGG TGGGGGTGGA CATCGACCCC 
TATCTGGTCA ACGCGGCCCG CGAAGACTAT CCGCAGGGCG ACTGGCGGGT GGGCGACCTG 
GCCGAGCTTG ACCTTGTGGA GCGCGGGGAA GAGCCTTTCG ACCTCGTGGT CTGCGCGGGA 
AACGTGATGA CGTTCCTCGC CCCCGGCACC GAAGTGGAAG TGCTGCGCAG GATGGGCGCC 
CACATCCGGG ACGGAGGCCG GATCGTCGTG GGCTTCGGCG CGGGCCGCGG CTATCCGTTT 
GAGCGGTTCT TCGCCGACGT GGCCGAAGCC GGTCTCGTCA CCGAGCTGTG CTTAGCCACC 
TGGGATCTGC GCCCGTTCAC CCCGGAGTCC GACTTTCTGG TGGCGGTGCT GGGACGCGCA 
GCCGAGACGC CGCCCACCGG GTGA
 
Protein sequence
MRKITRWEAM VQQNPGHSRW YVERFRTMAA QGNDLAGEAR MIDAMVGRGS RILDAGCGPG 
RVGGELAARG HHVVGVDIDP YLVNAAREDY PQGDWRVGDL AELDLVERGE EPFDLVVCAG 
NVMTFLAPGT EVEVLRRMGA HIRDGGRIVV GFGAGRGYPF ERFFADVAEA GLVTELCLAT 
WDLRPFTPES DFLVAVLGRA AETPPTG