Gene Tfu_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1997 
Symbol 
ID3580734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2330790 
End bp2331542 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID637685690 
ProductTetR family transcriptional regulator 
Protein accessionYP_290053 
Protein GI72162396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.354177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGCC CTAGGACACC GCTGCTCAGC CGAACGCGTA TCCAGGAAGC CGCCCTAGCC 
CTGGTCGACC GCGACGGGCT GCAAGGACTG TCCATGCGCA AGCTCGCCCA GGAGCTCAAC 
GTCCAGGCCC CGTCTCTGTA CAGCTACTAC CGCACCAAAG AAGAGCTGCT GAACGACGTC 
GTCGACCGCA TTACCGCCAA CATCGACGTT TCTGGCTTCA AAGACGGGGA CTGGAAACGC 
GGACTCATCG TATGGGCGCG CTCCTACCGC GACGCTCTCG CGGCCCATCC CAACATGGTC 
GCCTTCATAG CGTCCGGGCC GGGACGCCGC GAAGAGGCCC TGCGGCGGGC CGACGCGATC 
CACGGCGGCC TCGTCTCCGC GGGCTGGCCG GCCCGGCTCG CCACGATGAT CGGCGCCTCC 
ACCCGCTACC TCGTGGTGGG CGCCGCGATC AACTCCTTTG CCCGCGGCTT CGATGCAGAC 
GCCCGCGTCT ACCAGGACCG CTACCCCAAC CTGTCCCAGG CGCACCGTCT GCCGGAACTC 
GCCGCTGAGA TCGACAACGA CAGTTTCGAA CTCGCCCTGC GCGCCTTCAT CGCGGGCCTG 
GAAGTGCTCT ACCCCGACAA GGCCGGCGCC GCGCGCCGCC CGGAGGCCGC CGCAGCATCC 
GCGGGGCAGC ACGCCAAGGC GGGGTCCCGC GCCTCCGCGG GAGCCGCCGA CCCTTCCAGA 
GCACCGCTGG AGGACCACAC TCCGGAACGC TGA
 
Protein sequence
MARPRTPLLS RTRIQEAALA LVDRDGLQGL SMRKLAQELN VQAPSLYSYY RTKEELLNDV 
VDRITANIDV SGFKDGDWKR GLIVWARSYR DALAAHPNMV AFIASGPGRR EEALRRADAI 
HGGLVSAGWP ARLATMIGAS TRYLVVGAAI NSFARGFDAD ARVYQDRYPN LSQAHRLPEL 
AAEIDNDSFE LALRAFIAGL EVLYPDKAGA ARRPEAAAAS AGQHAKAGSR ASAGAADPSR 
APLEDHTPER