| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1995 |
|---|
| Symbol | |
|---|
| ID | 3580732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2328338 |
|---|
| End bp | 2329393 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685688 |
|---|
| Product | putative integral membrane transport protein |
|---|
| Protein accession | YP_290051 |
|---|
| Protein GI | 72162394 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCT CTCCCTGGTC TGTCGCGCTC GCGGCGGACG ACTTCACGAT CCTCAACCTG
CCGCTGTGGG CCTGGCAGGT GGCGTTCTGC GCCGTCGGCA TAGTGGTACT GGCGCTGTTG
GCTCGCACGA TCTGGCATCC CACGACCGCT TCCCTGCGCT GGTGGGCGTT GGGCAACGTC
ATCGTCAATT CCGGAATCGC GGTCACTGGA GCGACTGTGC GGGTCACCGA GTCGGGGCTG
GGCTGCTCGG AATGGCCCAA GTGCACCCCG GAGAGCTTCG TCCCCGTCGG CACCCACCAC
TCCGCATTCC ACGCGGCTAT CGAGTTCGGC AACCGGACTC TCACCTTCCT GCTGCTCGCT
GTCGGGGTGA TCGTCCTCCT GGCGACACTG CGTATGCGTC CCCGCAGACG CGACCTGCTG
GTCCTGGCCG CCCTGGTGCC GGCGGGCGTG CTCGGCCAGG CGGTCGTCGG CGGGATCACC
GTCTGGAGTG ACCTGCACCC TGCGTCGGTG GGCGCGCACT TCGTCCTCTC GGTCCTCGTG
GTGATCCTCA CCATGGCCTA CTACGTGCGC TGCCGGGAGC CCGAAGGAGA ACTGCGGCTC
ACCGTCACCC CGCGGCTCCG CCTCGCCGCC ACTGTGCTCG TCCCGGTCGG GCTGGTCCTC
ATCGTCGCCG GAGTCGTCGT CACCGGGACC GGTCCGCACG GCGGTGACGC TACCGCGCCG
CGCTGGGACT TCCCGCTCGA CGCGGTCACC CGCATCCACT CCCTCCTGGC GTGGCTCACC
ACCGCGCTGA CCGTCGCCGT CCTCGTCATG GCGGCGCGGA GCCGCGCACC GCGCCTCGTG
CAGGTCCAGG CGTGGCTGCT GCTCGCCGCA CTACTCGCCC AGGGAGCGCT CGGCTACGCG
CAGTACCTGC TGGGACTGCC TTCCTGGATG GTCGTGCTGC ACGTCTTGGG CTCCCTGCTG
GTGTGGACCG CGATCCTGCG GCTGTACTTC GCCACCGCGG AACGCGTGGC TGTCACCAGC
CCGACGGTTG CGACGGAGCT TGCTGCCCAC CGGTAG
|
|---|
| Protein sequence | MTASPWSVAL AADDFTILNL PLWAWQVAFC AVGIVVLALL ARTIWHPTTA SLRWWALGNV
IVNSGIAVTG ATVRVTESGL GCSEWPKCTP ESFVPVGTHH SAFHAAIEFG NRTLTFLLLA
VGVIVLLATL RMRPRRRDLL VLAALVPAGV LGQAVVGGIT VWSDLHPASV GAHFVLSVLV
VILTMAYYVR CREPEGELRL TVTPRLRLAA TVLVPVGLVL IVAGVVVTGT GPHGGDATAP
RWDFPLDAVT RIHSLLAWLT TALTVAVLVM AARSRAPRLV QVQAWLLLAA LLAQGALGYA
QYLLGLPSWM VVLHVLGSLL VWTAILRLYF ATAERVAVTS PTVATELAAH R
|
|---|
| |