Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1994 |
Symbol | |
ID | 3580731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2326990 |
End bp | 2327892 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685687 |
Product | putative integral membrane protein |
Protein accession | YP_290050 |
Protein GI | 72162393 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAGCG ACTCTCCTGG GCAGTCTGCA CCGGGTCCGT TCTCCCGGGC TGCGGCGCTC GTCCGCGCCG CGGGCACTGC CATCCCGGCG ACCTGGCTGG TCGGGGTGAG CATCCTGTCG GTCCAGTTCG GCGCAGGGGT GGCGAAGAAC CTGTTCGCGG TCCTCCCCCC AAGCACCGTG GTGTGGCTGC GCCTGCTGGC TTCGGCCCTG GTGCTGCTGT GCTTCGCCCC TCCCCCACTG CGCGGGCACT CTCGCACGGA CTGGCTGGTC GCGGTCGGTT TCGGCACGTC GCTGGCGGTC ATGAACTACG CCATCTACGA ATCGTTTGCG CGCATCCCGC TGGGCGTGGC CGTGACCATC GAATTCCTGG GCCCGCTGGC CGTGGCCGTG GCGGGATCGC GCCGCTGGCG GGACCTGGTG TGGGTGGTGC TCGCCGGCAC GGGGGTTGCG CTGCTGGGAT GGGACGACGG CGGGGTCACC CTGGCAGGGG TGGCGTTCGC CGCCCTCGCG GGCGCTGCGT GGGCGTGCTA CATCCTGCTC AGCGCAGCCA CCGGCCGACG CTTCCCCGGG ACTTCCGGAC TGACGGTGGC CAGTGTGATC GGCGCAGTGC TCGTCGCGCC GATGGGCCTC GCCCACAGCA GCCCGGCCCT GCTCGACCCG AGCGTGCTGC TGACCGGTCT TGCCGTGGGG CTGCTCTCCT CGGTCATCCC CTACTCCCTG GAAATGCAGG CGTTGCGCCG CATTCCGCCC GGGGTGTTCG GCATCCTGAT GAGCCTAGAA CCGGCGGCGG CCGCACTCGT GGGCCTGGTC CTGCTCGGGG AATTCCTCAC CGTCGCCCAG TGGGCCGCGG TGGCCTGCGT GGTGGTCGCC AGTGTGGGTG CGACCCGCTC CGCCCGGCTG TGA
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Protein sequence | MNSDSPGQSA PGPFSRAAAL VRAAGTAIPA TWLVGVSILS VQFGAGVAKN LFAVLPPSTV VWLRLLASAL VLLCFAPPPL RGHSRTDWLV AVGFGTSLAV MNYAIYESFA RIPLGVAVTI EFLGPLAVAV AGSRRWRDLV WVVLAGTGVA LLGWDDGGVT LAGVAFAALA GAAWACYILL SAATGRRFPG TSGLTVASVI GAVLVAPMGL AHSSPALLDP SVLLTGLAVG LLSSVIPYSL EMQALRRIPP GVFGILMSLE PAAAALVGLV LLGEFLTVAQ WAAVACVVVA SVGATRSARL
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