Gene Tfu_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1980 
Symbol 
ID3581311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2314807 
End bp2315325 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID637685673 
Producthypothetical protein 
Protein accessionYP_290036 
Protein GI72162379 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.426393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACC TGGTAGTGCT CGGGGTAGCC GACCGGGACC GGGCCGAACA GGCGCTTGAC 
ATCGCCGACG ACTTGGCCCG GCGGGAGCTG CTGCGGCTCA AGGATGCCGC CTACGTCTAC 
AAAGACGCCC GGGGCAGGCC CCGCATCCAG CAGACGCTGA ACGTGACCGG GGTGGGGGCC 
GCGGGCGGCG CCCTGTGGGG CACTCTGATC GGGGCGCTGT TCCTCTCCCC GGTGCTGGGG 
CTCGCAGTGG GGACCGCGAT CGGCGCTGTG GCGGGCCGAC TCACCGATAT CGGTATCGAC 
GACGATCTGA TCCGCCAGAT CGGACACCAG CTCGACGACG GGCGGGCCGC CGTGTTCCTG 
CTCGTCCACT CCGAGACACG GGACCGGGTC GTGGAAGCCC TCCGGCCCTT GGAACCCACC 
GTGCTGGAAA CCAGCCTGAC CCGGGACGAC GAACGGGAAC TGATCCGCGC CCTCCACGCC 
GACGAACCCG AGCCTCCCAC AGCCCCAGGG CACGTGTGA
 
Protein sequence
MAHLVVLGVA DRDRAEQALD IADDLARREL LRLKDAAYVY KDARGRPRIQ QTLNVTGVGA 
AGGALWGTLI GALFLSPVLG LAVGTAIGAV AGRLTDIGID DDLIRQIGHQ LDDGRAAVFL 
LVHSETRDRV VEALRPLEPT VLETSLTRDD ERELIRALHA DEPEPPTAPG HV