Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1970 |
Symbol | |
ID | 3581301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2302086 |
End bp | 2302850 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685663 |
Product | LamB/YcsF family protein |
Protein accession | YP_290026 |
Protein GI | 72162369 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.149579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATCG ATCTCAACTC CGACCTCGGT GAGAGCTTCG GCCGTTGGGA ACTCGGCGAC GACGAAGCAC TGCTCTCCGT GGTGACGAGC GCCAACGTCG CCTGCGGCTT CCACGCCGGA GACCCTCTCG TCCTCCGCCG GGTCTGCGAA CAAGCGGCCC GCCGGGGCGT CGTCATCGGA GCCCAAGTGG GCTACCGCGA CCTCGTCGGA TTCGGCCGCC GGTTCATCGA AGTAAGCCCC GACGAGCTGG TCAACGACGT CATCTACCAG ATCGGTGCGC TCGACGCGCT CGCCCGGGTC GCCGGGGAAC GGGTCCGCTA CGTCAAACCC CACGGCGCGC TCTACAACGC GATCGTCCAC CACGAAGACC AAGCCCGCGC CGTCGTCGAA GCAGTACGCC TCTACGACCC CGACCTGGCA GTCCTGGGAC TCCCCGGATC CCTGTGGCTG ACCTTGGCGG AAAAAGCCGG GCTACGCGTA GTCCGCGAAG CGTTCGCGGA CCGCGCCTAC ACCCCCGAAG GCACCCTGGT GCCGCGCCGC CACCCCGGAG CGGTCCTGCA CTCCCCGGAA GAAATCGCGG AACGCTGCCT GCGGATCGCC AACGGCGACC CCATCCCCGC CATCGACGGC ACCCCGATCC GGATCACCGC CGACTCCCTC TGCGTCCACG GCGACACCCC CGACGCGGTC CGAGTCGCCG AACAGGTCGC GCAGCGGCTC AGCAACGCAG GCATCAACCT CAAAGCGTTC GCCCACCACA GGTGA
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Protein sequence | MHIDLNSDLG ESFGRWELGD DEALLSVVTS ANVACGFHAG DPLVLRRVCE QAARRGVVIG AQVGYRDLVG FGRRFIEVSP DELVNDVIYQ IGALDALARV AGERVRYVKP HGALYNAIVH HEDQARAVVE AVRLYDPDLA VLGLPGSLWL TLAEKAGLRV VREAFADRAY TPEGTLVPRR HPGAVLHSPE EIAERCLRIA NGDPIPAIDG TPIRITADSL CVHGDTPDAV RVAEQVAQRL SNAGINLKAF AHHR
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