| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1959 |
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| Symbol | |
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| ID | 3580184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2289980 |
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| End bp | 2292934 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685651 |
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| Product | cellulose 1,4-beta-cellobiosidase |
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| Protein accession | YP_290015 |
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| Protein GI | 72162358 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.54299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCGT TACTGTCTCC CCGGCGCTGG CGCACGCTGG CCTCGGGGGC GCTCGCAGCG
GCCCTGGCCG CCGCTGTACT CTCCCCCGGC GTCGCGCACG CCGCCGTCGC CTGCTCGGTG
GACTACGACG ACTCCAACGA CTGGGGTAGC GGGTTCGTCG CCGAAGTCAA GGTGACCAAC
GAAGGCAGCG ACCCCATCCA GAACTGGCAA GTAGGCTGGA CCTTCCCCGG TAACCAGCAG
ATCACCAACG GCTGGAACGG CGTGTTCAGC CAGAGCGGCG CCAACGTCAC CGTCCGCTAC
CCGGACTGGA ACCCCAATAT CGCCCCCGGA GCCACCATCT CCTTCGGCTT CCAGGGCACC
TACAGCGGCT CCAACGACGC CCCGACCAGC TTCACCGTCA ACGGCGTCAC CTGCAGCGGA
TCCCAGCCCG CCAACCTGCC GCCCGATGTC ACCCTGACAT CCCCGGCCAA CAACTCGACC
TTCCTGGTCA ACGACCCGAT CGAGCTGACC GCGGTCGCCT CCGACCCCGA CGGCTCGATC
GACCGGGTGG AATTCGCCGC CGACAACACC GTCATCGGCA TCGACACCAC CTCCCCCTAC
AGCTTCACCT GGACGGACGC TGCCGCCGGC TCCTACTCGG TGACCGCGAT CGCCTACGAC
GACCAGGGAG CCAGGACCGT CTCCGCTCCC ATCGCCATCC GAGTGCTGGA CCGGGCCGCC
GTCATCGCCT CACCGCCCAC CGTCCGCGTG CCGCAGGGCG GCACCGCCGA CTTCGAGGTG
CGGCTGTCCA ACCAGCCCTC CGGCAACGTC ACGGTCACCG TGGCGCGCAC GTCGGGCAGC
TCCGACCTGA CCGTCTCCAG CGGCTCCCAA CTCCAGTTCA CCTCCAGCAA CTGGAACCAG
CCGCAGAAGG TGACCATCGC CTCCGCTGAC AACGGCGGAA ACCTGGCCGA GGCGGTCTTC
ACCGTCAGCG CCCCCGGCCA CGACTCGGCC GAGGTGACGG TCCGGGAGAT CGACCCGAAC
ACCAGCTCCT ACGACCAGGC CTTCCTGGAG CAGTACGAGA AGATCAAGGA CCCCGCCAGC
GGCTACTTCC GCGAATTCAA CGGGCTCCTG GTCCCCTACC ACTCGGTGGA GACCATGATC
GTCGAGGCTC CGGACCACGG CCACCAGACC ACGTCCGAGG CGTTCAGCTA CTACCTGTGG
CTGGAGGCGT ACTACGGCCG GGTCACCGGT GACTGGAAGC CGCTCCACGA CGCCTGGGAG
TCGATGGAGA CCTTCATCAT CCCCGGCACC AAGGACCAGC CGACCAACTC CGCCTACAAC
CCGAACTCCC CGGCGACCTA CATCCCCGAG CAGCCCAACG CTGACGGCTA CCCGTCGCCT
CTCATGAACA ACGTCCCGGT GGGTCAAGAC CCGCTCGCCC AGGAGCTGAG CTCCACCTAC
GGGACCAACG AGATCTACGG CATGCACTGG CTGCTCGACG TGGACAACGT CTACGGCTTC
GGGTTCTGCG GCGACGGCAC CGACGACGCC CCCGCCTACA TCAACACCTA CCAGCGTGGT
GCGCGCGAGT CGGTGTGGGA GACCATTCCG CACCCGTCCT GCGACGACTT CACGCACGGC
GGCCCCAACG GCTACCTGGA CCTGTTCACC GACGACCAGA ACTACGCCAA GCAGTGGCGC
TACACCAACG CCCCCGACGC TGACGCGCGG GCCGTCCAGG TGATGTTCTG GGCGCACGAA
TGGGCCAAGG AGCAGGGCAA GGAGAACGAG ATCGCGGGCC TGATGGACAA GGCGTCCAAG
ATGGGCGACT ACCTCCGGTA CGCGATGTTC GACAAGTACT TCAAGAAGAT CGGCAACTGC
GTCGGCGCCA CCTCCTGCCC GGGTGGCCAA GGCAAGGACA GCGCGCACTA CCTGCTGTCC
TGGTACTACT CCTGGGGCGG CTCGCTCGAC ACCTCCTCTG CGTGGGCGTG GCGTATCGGC
TCCAGCTCCT CGCACCAGGG CTACCAGAAC GTGCTCGCTG CCTACGCGCT CTCGCAGGTG
CCCGAACTGC AGCCTGACTC CCCGACCGGT GTCCAGGACT GGGCCACCAG CTTCGACCGC
CAGTTGGAGT TCCTCCAGTG GCTGCAGTCC GCTGAAGGTG GTATCGCCGG TGGCGCCACC
AACAGCTGGA AGGGAAGCTA CGACACCCCG CCGACCGGCC TGTCGCAGTT CTACGGCATG
TACTACGACT GGCAGCCGGT CTGGAACGAC CCGCCGTCCA ACAACTGGTT CGGCTTCCAG
GTCTGGAACA TGGAGCGCGT CGCCCAGCTC TACTACGTGA CCGGCGACGC CCGGGCCGAG
GCCATCCTCG ACAAGTGGGT GCCGTGGGCC ATCCAGCACA CCGACGTGGA CGCCGACAAC
GGCGGCCAGA ACTTCCAGGT CCCCTCCGAC CTGGAGTGGT CGGGCCAGCC TGACACCTGG
ACCGGCACCT ACACCGGCAA CCCGAACCTG CACGTCCAGG TCGTCTCCTA CAGCCAGGAC
GTCGGTGTGA CCGCCGCTCT GGCCAAGACC CTGATGTACT ACGCGAAGCG TTCGGGCGAC
ACCACCGCCC TCGCCACCGC GGAGGGTCTG CTGGACGCCC TGCTGGCCCA CCGGGACAGC
ATCGGTATCG CCACCCCCGA GCAGCCGAGC TGGGACCGTC TGGACGACCC GTGGGACGGC
TCCGAGGGCC TGTACGTGCC GCCGGGCTGG TCGGGCACCA TGCCCAACGG TGACCGCATC
GAGCCGGGCG CGACCTTCCT GTCCATCCGC TCGTTCTACA AGAACGACCC GCTGTGGCCG
CAGGTCGAGG CACACCTGAA CGACCCGCAG AACGTCCCGG CGCCGATCGT GGAGCGCCAC
CGCTTCTGGG CTCAGGTGGA AATCGCGACC GCGTTCGCAG CCCACGACGA ACTGTTCGGG
GCCGGAGCTC CCTGA
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| Protein sequence | MRSLLSPRRW RTLASGALAA ALAAAVLSPG VAHAAVACSV DYDDSNDWGS GFVAEVKVTN
EGSDPIQNWQ VGWTFPGNQQ ITNGWNGVFS QSGANVTVRY PDWNPNIAPG ATISFGFQGT
YSGSNDAPTS FTVNGVTCSG SQPANLPPDV TLTSPANNST FLVNDPIELT AVASDPDGSI
DRVEFAADNT VIGIDTTSPY SFTWTDAAAG SYSVTAIAYD DQGARTVSAP IAIRVLDRAA
VIASPPTVRV PQGGTADFEV RLSNQPSGNV TVTVARTSGS SDLTVSSGSQ LQFTSSNWNQ
PQKVTIASAD NGGNLAEAVF TVSAPGHDSA EVTVREIDPN TSSYDQAFLE QYEKIKDPAS
GYFREFNGLL VPYHSVETMI VEAPDHGHQT TSEAFSYYLW LEAYYGRVTG DWKPLHDAWE
SMETFIIPGT KDQPTNSAYN PNSPATYIPE QPNADGYPSP LMNNVPVGQD PLAQELSSTY
GTNEIYGMHW LLDVDNVYGF GFCGDGTDDA PAYINTYQRG ARESVWETIP HPSCDDFTHG
GPNGYLDLFT DDQNYAKQWR YTNAPDADAR AVQVMFWAHE WAKEQGKENE IAGLMDKASK
MGDYLRYAMF DKYFKKIGNC VGATSCPGGQ GKDSAHYLLS WYYSWGGSLD TSSAWAWRIG
SSSSHQGYQN VLAAYALSQV PELQPDSPTG VQDWATSFDR QLEFLQWLQS AEGGIAGGAT
NSWKGSYDTP PTGLSQFYGM YYDWQPVWND PPSNNWFGFQ VWNMERVAQL YYVTGDARAE
AILDKWVPWA IQHTDVDADN GGQNFQVPSD LEWSGQPDTW TGTYTGNPNL HVQVVSYSQD
VGVTAALAKT LMYYAKRSGD TTALATAEGL LDALLAHRDS IGIATPEQPS WDRLDDPWDG
SEGLYVPPGW SGTMPNGDRI EPGATFLSIR SFYKNDPLWP QVEAHLNDPQ NVPAPIVERH
RFWAQVEIAT AFAAHDELFG AGAP
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