Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1958 |
Symbol | |
ID | 3580183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2288689 |
End bp | 2289447 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637685650 |
Product | hypothetical protein |
Protein accession | YP_290014 |
Protein GI | 72162357 |
COG category | [S] Function unknown |
COG ID | [COG1865] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.617647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACACGG AGACGATCGG CGACGGCACC CTCCTCACCG CGCACCTGCG CTGGCGGCGC GACAACGGCC GCGCCCTTGC CGCAGTGCTC TGGCAGTGCG GCCCCGGCTG GCGCATGGCC GCCTCCAGCG TGCTCGGCGG CGGCCTCGGA CCACGGGACT ACGTCATCAA CGCCCAAGTC GACGGCGACT ACCGGCGGAC CGACCCGGAC AACCACCTCG AAGAACTCGC CACCCACTTC GGGATGACCG GCACCGGGGT AGGCCTGCTC ACCGCCGCCA ACGTCAGCGA AGCATGCTTC GCTGACGACC ACGGGGTCGA AGTCCTCGCC ACCGTCGGAC TCGGCCGCCC CACCTGGGCG GCCGCCGACC CCGCGCTCGA CGAAGCACGC CTCCCCGGCG AAGAGACCCG CCCCGGGACG ATCAACATCG TCGTCGCCGT GCCCGCCCCC ATGTCGGACA CCGCACTCGT CAACCTGGTC GCCACTGCCA CCGAAGCCAA AGTCCAGGCA CTCTTCGACA GCGGGTACGC CTGCACCGGC ACCGCCTCAG ACGCGGTTTG CGTTGCGGCA CTCGTCGGCG ACACCCCGCC CGCCCAGCGG GAACTGTTCG GCGGAGTCCG CTCCCGCTGG GGCGGCCGAG TCGCCCGCGC CGTCTACGCC GCGGTAGCTG AAGGAGCCCG CCGGGAAGCC GCCCGCTCCC AGCAGCGCTC CCCGCACCGG GCTGCGGCCT ACTCCCCGTC GATGATGTCG GGCACGTAG
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Protein sequence | MDTETIGDGT LLTAHLRWRR DNGRALAAVL WQCGPGWRMA ASSVLGGGLG PRDYVINAQV DGDYRRTDPD NHLEELATHF GMTGTGVGLL TAANVSEACF ADDHGVEVLA TVGLGRPTWA AADPALDEAR LPGEETRPGT INIVVAVPAP MSDTALVNLV ATATEAKVQA LFDSGYACTG TASDAVCVAA LVGDTPPAQR ELFGGVRSRW GGRVARAVYA AVAEGARREA ARSQQRSPHR AAAYSPSMMS GT
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