| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1956 |
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| Symbol | |
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| ID | 3580181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2287417 |
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| End bp | 2288298 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685648 |
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| Product | endonuclease IV |
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| Protein accession | YP_290012 |
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| Protein GI | 72162355 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTCG CACCTTTCTC CCGTATCGGA GCGCACGTTC CGGTCTCCGG TGGCCTGGCC
AAGCGTGGGT TGTCCTACGC TGACGCGATC GGCGCCGAAG TCATCCAAGT CTTCGTCACC
AATCCGCGAA GCTGGGCACA TACTCCGGGG AACGCGGAGC AGGATGCGCT GCTGCGCGCC
CGCACTGACC TCCCGGTTTT CGTCCACGCC TGCTATCTGA TCAACTTGGG TTCGCCCGAC
GAGGAGATCG CTGCCCGGTC GGTGGCGTCG TTGAAGTACA CGCTGCAGCG GGCCGCGCAG
ATCGGGGCCC GCGGCGTGGT GGTGCACACC GGGTCCGCGG TGCGCGGGGG CCGTGCCGCC
GGTCTGGCAC GGGTGCGGGC CCGGCTGCTG CCGATTCTGG AGGCGCTGGA CGAGGCTGCG
CCGCCGGTCC TGCTGGAGCC GATGGCGGGG CAGGGGCAGG TGCTCTGCGC CACGGTGGAC
GATCTCGCCG ACTACTTGGA CGCGGTGGAC CGCCACCCTA AGGCGGGGGT GTGTCTGGAT
ACCGCGCACG TGTTCGGAGC GGGCCACGAC GTCTCCACCC GAGCGGGAAT GCGGACAATG
TTGGACCGGT TCGGCGAGGT GGTCGGAGCG GACCGGTTGC GGCTGGTGCA TGCCAATGAT
TCGGCTGCGC CGTGCGGGAG CCGCCGGGAC CGGCACGCCG GTATCGGACT GGGCTATATC
GGCGCTGACC CGTTCGCCGA AGTGTTCACG CACCCGGTTT CCGCGGGGGT TCCCGTGGTG
GTGGAGACCC CGGGCCCGGA GGGGCCGCAT GCCCGGGATG TGGCCACGCT CAAAGAGTTG
CGGGCGCAGG CTGCGACGCC GGAGCAGGAG GCTGCGCGGT GA
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| Protein sequence | MALAPFSRIG AHVPVSGGLA KRGLSYADAI GAEVIQVFVT NPRSWAHTPG NAEQDALLRA
RTDLPVFVHA CYLINLGSPD EEIAARSVAS LKYTLQRAAQ IGARGVVVHT GSAVRGGRAA
GLARVRARLL PILEALDEAA PPVLLEPMAG QGQVLCATVD DLADYLDAVD RHPKAGVCLD
TAHVFGAGHD VSTRAGMRTM LDRFGEVVGA DRLRLVHAND SAAPCGSRRD RHAGIGLGYI
GADPFAEVFT HPVSAGVPVV VETPGPEGPH ARDVATLKEL RAQAATPEQE AAR
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