| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1948 |
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| Symbol | |
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| ID | 3580626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2278131 |
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| End bp | 2279795 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685640 |
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| Product | hypothetical protein |
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| Protein accession | YP_290004 |
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| Protein GI | 72162347 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.561491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCCG AGCATGAGCC GCAACCCGAC CAGGCCGGTG CGGACCTTCC CGAACCGGAC
GGCTCGCGCC CTGAGTCGGC CGCGCCCCGC CTGGCCGCTG AGGCGGAGCG GCGGCTCAGC
CCGCTCACCG TGGTAACCAC CGCAATCCAG CACGGCCGTT CGGCGGGCCT GCCCGTGCTG
GTGGCGCTGT TCGCGGGCGA CTTCAACCCG TGGGTGCTTG GCGGCACAGT CCTGGTCGGT
GTCCTGCTGG TCGTCGCCGG CATCGTCCGC TACTGGACCG TGCGCTACCA GATCATCGGC
GAGCGACTGG AGATCCGCTC CGGTCTGATC TCCCGGAGCC GGCGCGCGAT CCCGCTGGAA
CGTATCCGAG GCGTCAACGT CACCTCCACC CTGCTGCATC GCATTTTCGG GCTGGCTGTG
GTCCGGATCG ACGCGGCCGC AGGCGGCGCC CTCCAACAGG AGGAGGCGAA GCTCGACGCG
ATCGCCACCG CCGAGGCGGA ACAGCTCCGC GTGGAACTGC TGCGCCGCCA CTCCCTCCTG
GTGGAGCACG AGGCGGCTGA GGCAGAGGAA CCAGCAGCGG AAACCGAGGC GGCCCCCGCG
GAAAGCGCGG AGGTCACGTA CTTCCGGATG CCGTGGCGCT GGTACCTCTA CGCGGTGCTG
AGCCCCGCCT ACCTGCTCAC CCCGTTTGCT GTGCTGGCGG CCCTGTTCGG TTTCTTCAAC
CAGTTCATCG ACGCTGAGGT GATCGGCGCC TACGTCATCG GCCAGGCGGA CACGATCTGG
GGGATCGTCA CCTCCCGGAG CGGGCTGCTG CTCCTCACCC TTGTCGGAGT GGTGGCGGCG
ATACTCGTGG CCATGCCGCT GTTCGCCGTG GTCTCCTACA TGATCAACCA GTGGCAGTTC
ACCCTGCACC GCCGCGGGGA GGCCCTGGTC ACCGAGCGTG GACTGTTCAC CCGGCACAGC
GTCACGTTGG AGTACCGCCG TATCCACGGT TACGAACTGC ACGACACCCT CGTGCAGCGG
CCGTGGGCTC TAGGCCGGCT GTCCGCGATC GTCACCGGGC TCGGCGGGTC CACGTCCCGT
TCGGCGCTGC TGCCGCTGGG GCCGCGGGCC GAGGTGGAGC GGATTGTGGC GCAAGCGTTG
CGTCCGTTCC ACGGCAAGCT GGTCGCCCAT CCCGCGGCTG CGCGCTCCCG CCGACTGTTC
CGCGCGGTGG TGCCGCCGCT GCTGCTCGCC GGGTGTGCGG CAGCACTCGG CTGGTTCTGG
GTGGCCGGTG GGCTGCTCGC GGTGGCGGTG CTGGGAGTGC CGCTGGGTAT GGACCGCTAC
CGCTCCCTGG GGCACGGCTA CGACGGGGAA CAGGTCAGTG TCCGCTCCGG GTCGCTCGCC
CGGGTGCAGG CCACGGTGGC CCGCTCCGCC ATCATCGGCT GGCGGTGGCG GCAGAGCGTG
TTCCAGCGTC GGGCCGGGCT GGCCACCATG AAAGCCACCG TTGGTGCGGG CAGCGGAGGA
TACGACGCGA TCGACGTCGA TTTCGCGGAC TCGGTGGCGT TCGCCCATGC CGTCACCCCG
GAACTGCTCG CCCCGTTCCT GGCAGCGTCT GCTGCCGGGG CTGCTGACCA GGCGGCGGAC
ACTTCCGGCC AGGAGGGTGA CCGTTCTGGC GGTGCGGGCG CCTAG
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| Protein sequence | MNAEHEPQPD QAGADLPEPD GSRPESAAPR LAAEAERRLS PLTVVTTAIQ HGRSAGLPVL
VALFAGDFNP WVLGGTVLVG VLLVVAGIVR YWTVRYQIIG ERLEIRSGLI SRSRRAIPLE
RIRGVNVTST LLHRIFGLAV VRIDAAAGGA LQQEEAKLDA IATAEAEQLR VELLRRHSLL
VEHEAAEAEE PAAETEAAPA ESAEVTYFRM PWRWYLYAVL SPAYLLTPFA VLAALFGFFN
QFIDAEVIGA YVIGQADTIW GIVTSRSGLL LLTLVGVVAA ILVAMPLFAV VSYMINQWQF
TLHRRGEALV TERGLFTRHS VTLEYRRIHG YELHDTLVQR PWALGRLSAI VTGLGGSTSR
SALLPLGPRA EVERIVAQAL RPFHGKLVAH PAAARSRRLF RAVVPPLLLA GCAAALGWFW
VAGGLLAVAV LGVPLGMDRY RSLGHGYDGE QVSVRSGSLA RVQATVARSA IIGWRWRQSV
FQRRAGLATM KATVGAGSGG YDAIDVDFAD SVAFAHAVTP ELLAPFLAAS AAGAADQAAD
TSGQEGDRSG GAGA
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