Gene Tfu_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1923 
Symbol 
ID3580831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2249276 
End bp2250445 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID637685615 
Productputative transcriptional repressor protein 
Protein accessionYP_289979 
Protein GI72162322 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.585113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACAG ATGCCCAGGT CACCCCGGGA TCTCAGGCTG CCCTGCGGCA GGCTAACCGG 
GAACGGGTGA TCGCTGCGCT GCGCAGGGGC GGAACGCTCA CCCAAGCCGA GATCGCCCGT
GCCACCGGCC TGTCCGCGGC GAGCGTGTCG AATATCGTGC GCGACCTGCG TGCCATGGGC
GTGGTGTCCG TCCGGGAGAC CTCCTCGAAC GGACGCCGGG CCCGGGCCGT CACCCTGCAG
CGCCCACCGG GGGTACTCGT CGCGATCGAC TTCACGCACT CCCGCCTCAC CGTGGCCCTG
GGCAACACCG ACGGGCGCGT GCTGCAGGAG GAGAGCATCG CCTACGACGT CTCCGAAGAC
CCGGTGCGGG GGGTGCGGCG GGCGGTCTGG CTGACCGAGA CCCTGCTGAC CCAGGCGCGG
GTGGACCGCT CCATGGTGCT CGGAGTCGCG GCGGCGATCC CCGGACCCGT CGACCCGGCC
ACCGGCCTCA TCGGGGATAT CACCAGCATG CCGCACTGGG CCGGCTTCAA CCCCGGGGCG
GAACTCCAAG AGCGCCTGGG ACTGCCGGTC TCCGTGGACA ACGACGCGAA CCTCTGCGCC
CTCGCCGAAC TGACCGAAGG CGCTGCCCGC GGCCTGGAGC ACGTCGTCTA CGTCAAAGTC
GCCCACGGGG TGGGCGCGGG CGTGATCCTC GGCGGGCGCC TGTTCCGCGG GATGAACGGC
AATGCGGGGG AGATCGGGCA CATCGGGCTC GACGAGCGCG GGCAGGTGTG CCGGTGCGGC
AACCGAGGCT GCCTGGAAAC CCTGGTCGGC ACGCCCTACC TGCTGGACAT GCTGCCGCAG
CAGGGCCGGG TCAAGCACGG GGCCAGCCTG GTCGACCTGC TCGAGGCGGC CCAGGAGGGC
GACCCCGGGT GCCGCCGGAT CATCGCGGAG GCCGGCGCTG CACTGGGCCG CGGCGTAGCA
GTCGTGGTCA ACATGGTCAA CCCGCAGATG GTCATTGTGG GGGGCGAGAT CGCCGAAGCG
GGAGAGCTGC TGCTCGACCC CATGCGCCGG GCCATGGAAC TGGGAGCCCT GGGGAACGCG
CTCACCGGAC TGCGCCTGGT CACCGGGGAG CTGGGGGAGC GCGCGGCGCT GCGGGGAGCG
CTGCAGGTCG TGCTTGACTC CACCTTCTGA
 
Protein sequence
MTTDAQVTPG SQAALRQANR ERVIAALRRG GTLTQAEIAR ATGLSAASVS NIVRDLRAMG 
VVSVRETSSN GRRARAVTLQ RPPGVLVAID FTHSRLTVAL GNTDGRVLQE ESIAYDVSED
PVRGVRRAVW LTETLLTQAR VDRSMVLGVA AAIPGPVDPA TGLIGDITSM PHWAGFNPGA
ELQERLGLPV SVDNDANLCA LAELTEGAAR GLEHVVYVKV AHGVGAGVIL GGRLFRGMNG
NAGEIGHIGL DERGQVCRCG NRGCLETLVG TPYLLDMLPQ QGRVKHGASL VDLLEAAQEG
DPGCRRIIAE AGAALGRGVA VVVNMVNPQM VIVGGEIAEA GELLLDPMRR AMELGALGNA
LTGLRLVTGE LGERAALRGA LQVVLDSTF