| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1920 |
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| Symbol | |
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| ID | 3580828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2245679 |
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| End bp | 2246932 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637685612 |
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| Product | putative ABC transporter transmembrane transport protein |
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| Protein accession | YP_289976 |
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| Protein GI | 72162319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.471458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGC AAACCACCCC GGCTCCCCAG GGCGCCACGG TCGCCCGGGA CCCCCGGCTC
ATCATGGACG GCTCCGGTCT AGGCGGGCTG GTGCGCGGCG CGCTGCGCCG GCTCCGCAGC
GGAGAACTCG GCCCGCTGCC GGTCCTCGTC GGACTCATCG TGATCGCCGG CGTCTTCTGG
AGCCTCAACC CCAAGTTCCT CACCGCCCAG AATCTGTCCA ACCTCACCCT GCAGATCGTC
GCCGTCGGCT TCATGGCCTG CGGCGTGATC ATGGTGCTGC TGCTCGGGGA GATCGACCTC
TCCGTCGGAT CGGTCGCAGG CGTGTGCGGC GTGATCGTGA CGCTCCTGGC AGTCAACTAC
CAGTGGAACG AGATCGCCGC GATCGTGGTC GCCATCCTCG CCGGCACCCT CATCGGCACC
CTGCACGGCA CGATCTTCGC CAAGATCGGG GTACCCGCCT TCGTGGTCAC CTTGGCCGGA
TTGATCGGCT GGCAGGGCGC CCAGCTCTAC CTGCTCGGCC CTGAAGGCAC GATCAACGTC
CCCTACAACG GCCTGATCGG TGCCATCACC CACACCTATC TCGTCCCGGC GGTCGGCTGG
GGGATCGGAA TCACCGCGGT CGCCCTCTAC GGGCTGATCA GCGTCCGCGG GGCGCGCCGC
CGCGCCGCGG CCGGGCTGCC CGCCAAGTCG GTCACGGAGA TCGGGGTGCG CACCGCGCTC
CTCGCCCTCC CCGTCCTCGG CGGGGTGTGG GTGCTCAACT CCTTCCGCGG AGTGCCCGTC
GCTTTCCTGC TCTTCGTCGG GGTCGTGGTG CTCTTCGACC TGATCCTGCG GAAGACCCGC
TACGGGCGGA TGGTGTTCGC CGTGGGCGGC AGCGCAGAAG CGGCACGCCG CGCCGGCATC
AACGTCGACC TGATCCGCAT CTCCGTGTTC GCTCTCGCCT CCACCCTGGC CGGGGTGGGC
GGCATCCTCC TCGTGTCGCG CAGCTACGCC GTCAACCAGC TCACCGGGGG CGGCGACGAC
CTGATGATGG CGATCGCGGC CGCGGTCATC GGCGGCACCA GCCTCTTCGG CGGACGCGGC
AGCGCCTACT CGGCCCTGCT CGGCGGCCTC GTGCTCGGCG CGATCTCCTC GGGGCTGTAC
CTGCTGCAGA TGGACTCCTC GGTGCGGTTC ATGATCACCG CGGTGGTCCT CCTGGTAGCG
GTCATCCTCG ACGCGGTGTC CCGCCGGACC CGCAAAGCCC ACGCCCGGGA GTAG
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| Protein sequence | MAQQTTPAPQ GATVARDPRL IMDGSGLGGL VRGALRRLRS GELGPLPVLV GLIVIAGVFW
SLNPKFLTAQ NLSNLTLQIV AVGFMACGVI MVLLLGEIDL SVGSVAGVCG VIVTLLAVNY
QWNEIAAIVV AILAGTLIGT LHGTIFAKIG VPAFVVTLAG LIGWQGAQLY LLGPEGTINV
PYNGLIGAIT HTYLVPAVGW GIGITAVALY GLISVRGARR RAAAGLPAKS VTEIGVRTAL
LALPVLGGVW VLNSFRGVPV AFLLFVGVVV LFDLILRKTR YGRMVFAVGG SAEAARRAGI
NVDLIRISVF ALASTLAGVG GILLVSRSYA VNQLTGGGDD LMMAIAAAVI GGTSLFGGRG
SAYSALLGGL VLGAISSGLY LLQMDSSVRF MITAVVLLVA VILDAVSRRT RKAHARE
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