Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1903 |
Symbol | |
ID | 3579792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2228442 |
End bp | 2229644 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685595 |
Product | thiolase |
Protein accession | YP_289959 |
Protein GI | 72162302 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0201769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGCGAA CTGCCCGCGA CGTCGTATTC GTCGACGGGG TGCGCACTCC GTTTGGTAAG GCCAATAAAG GCCTTTACAC CGAGACCCGC GCGGACGACC TCGTCGTCCG GGTCATCCGC GAACTGCTGC GCCGCAACCC CGCACTGCCC CCGGAACGCA TCGACGAAGT CGCTATCGCC GCCACCACCC AGATCGGCGA CCAGGGAATG ACCATCGGCC GCAGCGCCGC CATCCTCGCC GGACTGCCCC GCAGCGTGCC CGGCTACGCC ATCGACCGCA TGTGCGCGGG CGCCATGACC GCGGTGACCA CCACCGCGGC CGGCATCGCT TTCGGCGCCT ACGACGTCGT TATCGCCGGC GGTGTCGAAC ACATGGGCCG TCACCCCATG GGCGAAGGCG TGGACCCCAA CCCGCGCTAC CTCTCCGAGA AACTGGTGGA CCCCTCCGCC CTGATCATGG GCAACACCGC CGAGAACCTG CACGACCGCT ACCCCACCAT CACCAAGGAG CGCGCCGACG CCTACGCGGT GCGCAGCCAG GAGAAGACCG CCAAAGCCTA CGCCGAAGGC AAGATCCAGC CTGACCTGGT CGAAGTAGCG GTCCGCAGCA GCGAGAACGG CTACGGCCTG GCCACCGTCG ACGAACCGCC GCGACCCGGC ACCACCATGG AGGCGCTGGC CACCCTGAAG ACCCCGTTCC GCCCGCACGG CCGCGTGACC GCGGGCAACG CCGCGGGCCT CAACGACGGT GCCACCGGGG CGATCCTCGC CGCCGAAGAC GTCGCCGCGG AACTCGGCCT GACCGTCAAG ATGCGCCTGG TCGACTTCGC GTTCGCCGGA GTGGACCCCG AGGTCATGGG TGTCGGCCCC ATCCCGGCCA CCGAGAAGCT GCTCGCCCGC AACGGCCTGA CCATGGACGA CATCGGCCTC ATCGAGATCA ACGAGGCCTT CGCCGTCCAA GTGCTGGCCT TCCTGGAGCA CTTCGGCATC CCCGACGACG ACCCGCGGGT CAACCCGTGG GGCGGCGCCA TCGCGATGGG CCACCCGCTG GCCTCCTCGG GCGTGCGGCT GATGATGCAG CTGTCCCGCC TCTTCGCGGA ACGCCCCGAT GTCCGCTACG GCCTGACCAC CATGTGCGTG GGCATGGGCA TGGGCGGAAC GGTCCTGTGG GAGAACACCA ACTGGGAGGG GAACGCCAAG TGA
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Protein sequence | MPRTARDVVF VDGVRTPFGK ANKGLYTETR ADDLVVRVIR ELLRRNPALP PERIDEVAIA ATTQIGDQGM TIGRSAAILA GLPRSVPGYA IDRMCAGAMT AVTTTAAGIA FGAYDVVIAG GVEHMGRHPM GEGVDPNPRY LSEKLVDPSA LIMGNTAENL HDRYPTITKE RADAYAVRSQ EKTAKAYAEG KIQPDLVEVA VRSSENGYGL ATVDEPPRPG TTMEALATLK TPFRPHGRVT AGNAAGLNDG ATGAILAAED VAAELGLTVK MRLVDFAFAG VDPEVMGVGP IPATEKLLAR NGLTMDDIGL IEINEAFAVQ VLAFLEHFGI PDDDPRVNPW GGAIAMGHPL ASSGVRLMMQ LSRLFAERPD VRYGLTTMCV GMGMGGTVLW ENTNWEGNAK
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