Gene Tfu_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1901 
Symbol 
ID3579790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2225998 
End bp2227260 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID637685593 
ProductHRDC:3'-5' exonuclease 
Protein accessionYP_289957 
Protein GI72162300 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAACT CCAAGACCGA AGAAAGCCCC GATCCTGAGT CCACTGCCTC AGAACAGACG 
CCTGAAGCTC CCCTGCTGAG CGAGCCCAGA GACGGGATTC CCCCGGTCGT CGCCGACGAT
GAGGAACTGG CACGCGTGGC CGCCAAGTTC GCCGCGGGCA GCGGGCCGGT CGCGGTGGAC
GCCGAACGCG CCTCGGGATA CCGCTACGGA CAGCGCGCCT ACCTGGTCCA ACTACGCCGG
GCCGGGGCCG GCACGGCGCT GATCGACCCG GTGGCCTGTC CTGATCTGTC GGTGTTGCGG
GACGCGGTCG GCGACGCCGA GATGGTGCTG CACGCGGCCC ACCAGGACCT GCCCTGTCTC
ACCGAAGTGC ACCTGCGCCC GCGGCGCTTG TTCGACACCG AGTTGGCCGG GCGGCTGCTC
GGCTACCAGC GGGTCGGCTT GGGTGCCATG GTGGAGCGGG TCCTGGGCGT CCGGCTCGCT
AAAGAGCATG CTGCGGTGGA CTGGTCGACC CGGCCGCTGC CGGAGGACTG GCTGCGCTAT
GCCGCGCTGG ATGTCGAGGT CCTCATCGAG CTGCGGGACG CGTTGGAAGC TGAACTGGCT
GAGACGGGCA AGCTGGAGTG GGCACGCCAG GAGTTCGCGG CGGTACTGGC CGCTCCGCCG
AAAGAGCCGC GTCCTGATCC GTGGCGGCGC ACTTCGGGGA TCCACCGGGT CCGCAGCCAG
CGCGGCTTGG GTGTGGTTCG GGAACTGTGG CTGGAACGCG ACCGGATTGC CCGGGAGCGC
GACCTGTCTC CGGGCCGGGT GCTGCAAGAC TCGGCGATCG TGGAGGCCGC CCTGGCCATG
CCCAGGACCC CGCAGGAGTT GACCGCGATC AAAACGTTCA CGGTCCGCCT GGCCCGCCGC
TATGTCCCGG TGTGGCTCAA AGCCATCAAC CGGGTGCGGG ACATGAAACC GGCGGAGCTG
CCCCAGCCGA GTCCGCCAGG CTACGGGCCC CCGCCCACGA ACCGGTGGGC CGACCGGGAT
CCAGCCGCGG CGCGGCGGCT CGAGGCGGCG CGTTCCGTGG TCGCGGAGAT CGCGGAGCGG
GTGGGCATGC CGACGGAGAA CCTGCTGCAG CCGGATGCGG TCCGCCGTCT CGCCTGGTCG
CCGCCGAGCC AGGTCAGTGT CGACTCGGTG GCCGAGCACC TGCGCACGCA CCAGGCCCGT
GACTGGCAGA TCGAGTTGAC TGCGGCTGCG CTGGCCGAGG CGCTGCGTGC CGCGGACCGT
TGA
 
Protein sequence
MLNSKTEESP DPESTASEQT PEAPLLSEPR DGIPPVVADD EELARVAAKF AAGSGPVAVD 
AERASGYRYG QRAYLVQLRR AGAGTALIDP VACPDLSVLR DAVGDAEMVL HAAHQDLPCL
TEVHLRPRRL FDTELAGRLL GYQRVGLGAM VERVLGVRLA KEHAAVDWST RPLPEDWLRY
AALDVEVLIE LRDALEAELA ETGKLEWARQ EFAAVLAAPP KEPRPDPWRR TSGIHRVRSQ
RGLGVVRELW LERDRIARER DLSPGRVLQD SAIVEAALAM PRTPQELTAI KTFTVRLARR
YVPVWLKAIN RVRDMKPAEL PQPSPPGYGP PPTNRWADRD PAAARRLEAA RSVVAEIAER
VGMPTENLLQ PDAVRRLAWS PPSQVSVDSV AEHLRTHQAR DWQIELTAAA LAEALRAADR