Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1901 |
Symbol | |
ID | 3579790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2225998 |
End bp | 2227260 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685593 |
Product | HRDC:3'-5' exonuclease |
Protein accession | YP_289957 |
Protein GI | 72162300 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAACT CCAAGACCGA AGAAAGCCCC GATCCTGAGT CCACTGCCTC AGAACAGACG CCTGAAGCTC CCCTGCTGAG CGAGCCCAGA GACGGGATTC CCCCGGTCGT CGCCGACGAT GAGGAACTGG CACGCGTGGC CGCCAAGTTC GCCGCGGGCA GCGGGCCGGT CGCGGTGGAC GCCGAACGCG CCTCGGGATA CCGCTACGGA CAGCGCGCCT ACCTGGTCCA ACTACGCCGG GCCGGGGCCG GCACGGCGCT GATCGACCCG GTGGCCTGTC CTGATCTGTC GGTGTTGCGG GACGCGGTCG GCGACGCCGA GATGGTGCTG CACGCGGCCC ACCAGGACCT GCCCTGTCTC ACCGAAGTGC ACCTGCGCCC GCGGCGCTTG TTCGACACCG AGTTGGCCGG GCGGCTGCTC GGCTACCAGC GGGTCGGCTT GGGTGCCATG GTGGAGCGGG TCCTGGGCGT CCGGCTCGCT AAAGAGCATG CTGCGGTGGA CTGGTCGACC CGGCCGCTGC CGGAGGACTG GCTGCGCTAT GCCGCGCTGG ATGTCGAGGT CCTCATCGAG CTGCGGGACG CGTTGGAAGC TGAACTGGCT GAGACGGGCA AGCTGGAGTG GGCACGCCAG GAGTTCGCGG CGGTACTGGC CGCTCCGCCG AAAGAGCCGC GTCCTGATCC GTGGCGGCGC ACTTCGGGGA TCCACCGGGT CCGCAGCCAG CGCGGCTTGG GTGTGGTTCG GGAACTGTGG CTGGAACGCG ACCGGATTGC CCGGGAGCGC GACCTGTCTC CGGGCCGGGT GCTGCAAGAC TCGGCGATCG TGGAGGCCGC CCTGGCCATG CCCAGGACCC CGCAGGAGTT GACCGCGATC AAAACGTTCA CGGTCCGCCT GGCCCGCCGC TATGTCCCGG TGTGGCTCAA AGCCATCAAC CGGGTGCGGG ACATGAAACC GGCGGAGCTG CCCCAGCCGA GTCCGCCAGG CTACGGGCCC CCGCCCACGA ACCGGTGGGC CGACCGGGAT CCAGCCGCGG CGCGGCGGCT CGAGGCGGCG CGTTCCGTGG TCGCGGAGAT CGCGGAGCGG GTGGGCATGC CGACGGAGAA CCTGCTGCAG CCGGATGCGG TCCGCCGTCT CGCCTGGTCG CCGCCGAGCC AGGTCAGTGT CGACTCGGTG GCCGAGCACC TGCGCACGCA CCAGGCCCGT GACTGGCAGA TCGAGTTGAC TGCGGCTGCG CTGGCCGAGG CGCTGCGTGC CGCGGACCGT TGA
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Protein sequence | MLNSKTEESP DPESTASEQT PEAPLLSEPR DGIPPVVADD EELARVAAKF AAGSGPVAVD AERASGYRYG QRAYLVQLRR AGAGTALIDP VACPDLSVLR DAVGDAEMVL HAAHQDLPCL TEVHLRPRRL FDTELAGRLL GYQRVGLGAM VERVLGVRLA KEHAAVDWST RPLPEDWLRY AALDVEVLIE LRDALEAELA ETGKLEWARQ EFAAVLAAPP KEPRPDPWRR TSGIHRVRSQ RGLGVVRELW LERDRIARER DLSPGRVLQD SAIVEAALAM PRTPQELTAI KTFTVRLARR YVPVWLKAIN RVRDMKPAEL PQPSPPGYGP PPTNRWADRD PAAARRLEAA RSVVAEIAER VGMPTENLLQ PDAVRRLAWS PPSQVSVDSV AEHLRTHQAR DWQIELTAAA LAEALRAADR
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