Gene Tfu_1900 details

Gene Information

• Locus tag: Tfu_1900
• ID: 3579789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2225313
• End bp: 2225894
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637685592
• Product: hypothetical protein
• Protein accession: YP_289956
• Protein GI: 72162299

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCCTC ACAGTAGGTC TGATGAGGCT CCGCCCGCGT TCCTGCGGGC AGTGCAGAGT 
CTGCACACCC GAACGGTGCG GCCTGAGATC GTGGTGGAGG ACATTCCTGC GCCGCGGCGC 
CTTGCCCCGT ATACGGTCGC AATGGCGGCG ACGGTGCACA CCGACGAGGG GGACGCGGCG 
TTCGGACGGT TGATCGTGCT GTACGACCCG GAGGAGTCCC GAGGCTGGCC GGGGCCGTTC 
CGGATGGTGG CCTATGTGAG CGCCGAACTG GAACCGGACT TGTCAGGGGA CCCGCTGCTC 
GGCCAGGTGG CCTGGAGTTG GCTGACCGAG GCCCTGGAGG CGCAGGGCGC GGACCATCGC 
GCACTGAGCG GGACGGTCAC CCGCGCCACC ACGGAGGGCT TCGGCCTCAA AGCGGGGGAG 
CCCACGACGA CGGAGGTGGA GGTCCGGGCT TCGTGGACGC CGACGGAGGC CGAAGACCTG 
TCCGCGCACC GGGCCGCCTG GCTGGATCTG CTGTCCGTTG CCGCCGGACT CCCCCCGGTG 
GATGTGACGG ATATCTCTCG CAGGGCGCGT TCTGATGCTT GA 

 

Protein sequence

MPPHSRSDEA PPAFLRAVQS LHTRTVRPEI VVEDIPAPRR LAPYTVAMAA TVHTDEGDAA 
FGRLIVLYDP EESRGWPGPF RMVAYVSAEL EPDLSGDPLL GQVAWSWLTE ALEAQGADHR 
ALSGTVTRAT TEGFGLKAGE PTTTEVEVRA SWTPTEAEDL SAHRAAWLDL LSVAAGLPPV 
DVTDISRRAR SDA