| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1899 |
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| Symbol | hemE |
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| ID | 3579788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2224117 |
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| End bp | 2225202 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685591 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_289955 |
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| Protein GI | 72162298 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCTTGG GACATGCCGC GCGGTCACTC AGAGAGCATG GCACGATCAG AAGTGTGACG
CTACAAGACT CTGCTTTTCT CCGGGCCTGC CGCAGGCAGC CCGTCCCGCA CACCCCGGTA
TGGTTCATGC GCCAGGCCGG ACGCTCCCTG CCGGAGTACC GGAAGCTCCG CGAAGGCGTG
CCCATGCTGG AAGCCTGCGC CCGGCCGGAC ATGATCGTCG AGATCACCTT GCAGCCGGTG
CGCCGGTACA ACGTCGACGC CGCGATCTTC TTCAGCGACA TCATGGTCCC GCTCAAGGCC
ATCGGCGTCG ACCTCGACAT CAAACCCGGC GTCGGCCCGG TCGTCGCCGA GCCGATCCGC
GACCTTGCCG CCACTCGGCG GCTGCGTGGC CTCGAACCCG ACGACGTGCC GTACGTAACC
GAGGCGATCC GCGAACTGGT GCGGGAACTC GGCAGCCGTC CACTCATCGG GTTTGCCGGA
GGGCCGTTCA CGCTCGCCTC CTACCTGATT GAAGGCGGGC CCTCCCGGCA CCACGAGCAC
ACCAAGGCCT TGATGTACGG CGCGCCCGAG GTATGGACTG AACTGATGCG GCGGCTGTCC
GCCATCACCT TGGAATTCCT GCGGGTGCAG ATCGCCGCGG GGGCCAGCGC CGTGCAGCTG
TTCGACTCCT GGGTGGGAGC GCTCAGCGCG GAGGACTACC GGGCCAACGT CCTGCCCTAC
TCCTCGTGGA TCTTCGCCCA GCTCGCCGAG TTCGACGTGC CCCGCATCCA CTTCGGGGTC
GGCACCGGCG AGCTGCTGGG ATTGCTTAGC GAGGCCGGTG CCGACGTGGT GGGCGTGGAC
TGGCGGGTGC CGCTCGACCA GGCAGCGCGA CGGGTCCGTC CCCACACCGC ACTCCAGGGG
AACCTCGACC CGGCGGTGCT GTTCGCCCCG TGGAGCGTGG TCGCGGAACG CACCGACGAC
GTCTTGGCCC GCGCCAAGGC CGCCGAAGGC CACGTGTTCA ACCTCGGCCA CGGAGTGCTT
CCCACCACCG ACCCGGCAGT CCTAGAGCGG CTGGTGGAGT ACGTCCACAC GCAGACCGCG
AACTGA
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| Protein sequence | MILGHAARSL REHGTIRSVT LQDSAFLRAC RRQPVPHTPV WFMRQAGRSL PEYRKLREGV
PMLEACARPD MIVEITLQPV RRYNVDAAIF FSDIMVPLKA IGVDLDIKPG VGPVVAEPIR
DLAATRRLRG LEPDDVPYVT EAIRELVREL GSRPLIGFAG GPFTLASYLI EGGPSRHHEH
TKALMYGAPE VWTELMRRLS AITLEFLRVQ IAAGASAVQL FDSWVGALSA EDYRANVLPY
SSWIFAQLAE FDVPRIHFGV GTGELLGLLS EAGADVVGVD WRVPLDQAAR RVRPHTALQG
NLDPAVLFAP WSVVAERTDD VLARAKAAEG HVFNLGHGVL PTTDPAVLER LVEYVHTQTA
N
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