| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1891 |
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| Symbol | |
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| ID | 3579474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2216031 |
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| End bp | 2218154 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637685583 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_289947 |
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| Protein GI | 72162290 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGG TGGAAGTCTG GCCTGGTCAC GCGTATCCGC TCGGGGCGAC CTACGACGGG
TCCGGAACCA ACTTCTCGCT TTTCTCCGAA GTCGCGACCG GGGTAGAACT CTGCCTGTTC
GACGACGACG GGGCGGAGAC TCGGGTTCCG CTCACCGAAC AGGACGGCCA CGTCTGGCAC
GGCTACCTGC CGACGGTGGG TCCCGGACAG CGGTACGGAT ACCGCGTCCA CGGACCTTAC
GATCCGGAAC GTGGCCTCCG CTGCAACCCC AACAAGCTCC TCGTCGACCC CTACGCCAAG
GCCATCGACG GGCAGATTCA CTGGCACGAG TCCCTCTTCG ACTACCACTT TGCCGACCCT
GGCCGGGTCA ACAACCACGA CAGCGCCCCC TACGTCCCCA CCTGCGTCGT CGTCAGCCCG
TTCTTCGACT GGGGGGCCGA ACAGCACCCC AACATCCCCT ACCACGAGAC GGTCATCTAC
GAGGCCCACG TCCGCGGGAT GACCATCCGC CACCCCGACG TGCCGCCGCC GCTCCGCGGC
ACCTACGCCG GAATGGCGCA CCCCGCCATC ATCGAGCACC TTCTCTCCCT GGGCGTCACC
GCGGTGGAGC TCATGCCGAT CCACCACTTC CTGCCGGAGC ACGCCCTGGT CGCCCGAGGG
CTCACCAACT ATTGGGGCTA CAACACCCTG GCGTTCTTCG CGCCGCACAG CGGATACGCC
GCCACCGGGA CCCGGGGCCA TCAAGTCCAG GAGTTCAAAA CCATGGTCAA GGCCCTCCAC
CAGGCGGGGA TCGAAGTCAT CCTCGACGTG GTGTACAACC ACACCGCGGA AGGCGACCAC
ATGGGCCCCG CCCTGTCCCT GCGCGGCATC GACAACCTCG CCTACTACCG GGTGCGGGAA
GACAATCCGC GCTACTACCT GGACTACACC GGCTGCGGCA ACAGCCTCAA CGTGCGCCAC
CCGCACTCGC TGCAGCTCAT CATGGACTCG CTGCGCTACT GGGTGCTCGA CATGCACGTC
GACGGTTTCC GCTTTGACCT CGCCGCCGCC CTCGCCCGGG AGTTCCACGA CGTGGACCGG
CTCAGCACAT TCTTCGACAT TGTCCAGCAG GACCCGGTCA TCTCCCAGGT CAAGCTCATT
GCCGAACCGT GGGACGTGGG CCCCGGCGGC TACCAGGTCG GTAACTTCCC GCCCCTGTGG
ACCGAGTGGA ACGGGAAATA CCGCGACACT GTCCGCGACT TCTGGCGGGG CTACCCCGTA
CTGCCGGAGC TCGCCTCCCG CATCTCCGGC TCCTCCGACC TCTACCAGGC CGACGGGCGC
CGCCCCGTGG CTTCCATCAA CTTCGTCACC TGCCACGACG GCTTCACCTT GGCCGACCTC
GTCTCCTACG ACCGCAAACA CAACGAAGCC AACGGGGAGG ACAACCGGGA CGGCACCGAC
GACAACCGCT CGTGGAACCA CGGCACGGAA GGCCCCACCA CCGACTCTGC CATCGCCACG
CTGCGCCGCC GCCAGATGCG CAACATGCTG ACCACGCTCA TGCTCAGCCA AGGCGTGCCC
ATGCTCTCCC ACGGCGACGA GATCGGCCGT ACCCAACACG GCAACAACAA CGCCTACTGC
CAGGACAACC CCATCTCCTG GGTGGACTGG GAGCTCGCCC GCCGCAACGC CGACCTGCTC
GACTTTGTGC GCACCCTGTC CCGGCTGCGC CGGGAGCACC CGGTGTTCCG GCGTCGCCGC
TTCTTCCAGG GGGCCCTCCC CGGGCGGGGC AAGCAGCGCG ACATCGCCTG GCTGCGCCCG
GACGGCACGC TCATGGAGGA TGCCGACTGG GGGCGGGGGT GGCGCGCCCT CGGCGTGTTC
CTCAACGGCG ACGCGATCAC CGAGCCGGAC CGGATGGGCC GCCGGATCCG CGACGACTCG
TTCCTCCTCC TGCTCAACGC GGGGATCAAC GACGTGCAGT TCACCCTGCC CGGTCCCAGC
TACAGCGCGG CGTGGGAGAC GGTGGTCGAC ACGGCCGACC CTGAGGTGGC CGGCCGCCCC
TACTTGCCCG CCGGCAGCGA CGTCACCGTG ATCGACCGGT CGTTCCTGGT GCTCAAGGGG
GTGACGAAAG CCCTGCCCTC CTGA
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| Protein sequence | MPMVEVWPGH AYPLGATYDG SGTNFSLFSE VATGVELCLF DDDGAETRVP LTEQDGHVWH
GYLPTVGPGQ RYGYRVHGPY DPERGLRCNP NKLLVDPYAK AIDGQIHWHE SLFDYHFADP
GRVNNHDSAP YVPTCVVVSP FFDWGAEQHP NIPYHETVIY EAHVRGMTIR HPDVPPPLRG
TYAGMAHPAI IEHLLSLGVT AVELMPIHHF LPEHALVARG LTNYWGYNTL AFFAPHSGYA
ATGTRGHQVQ EFKTMVKALH QAGIEVILDV VYNHTAEGDH MGPALSLRGI DNLAYYRVRE
DNPRYYLDYT GCGNSLNVRH PHSLQLIMDS LRYWVLDMHV DGFRFDLAAA LAREFHDVDR
LSTFFDIVQQ DPVISQVKLI AEPWDVGPGG YQVGNFPPLW TEWNGKYRDT VRDFWRGYPV
LPELASRISG SSDLYQADGR RPVASINFVT CHDGFTLADL VSYDRKHNEA NGEDNRDGTD
DNRSWNHGTE GPTTDSAIAT LRRRQMRNML TTLMLSQGVP MLSHGDEIGR TQHGNNNAYC
QDNPISWVDW ELARRNADLL DFVRTLSRLR REHPVFRRRR FFQGALPGRG KQRDIAWLRP
DGTLMEDADW GRGWRALGVF LNGDAITEPD RMGRRIRDDS FLLLLNAGIN DVQFTLPGPS
YSAAWETVVD TADPEVAGRP YLPAGSDVTV IDRSFLVLKG VTKALPS
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