Gene Tfu_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1889 
Symbol 
ID3579472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2214131 
End bp2214913 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID637685581 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_289945 
Protein GI72162288 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCCGA GTCTTCCGCC TCTCCTTCGT CGGGCTCCAC GCCGCGGCGT TCCCCCCTTC 
CACTACGACG CCGACCGGGG AGGAGCAGCG TTGAACATCA CGGCCGACGG CGCGGCGTTC
GCCGCTGAGG CTGCCGCCCG CCTGGAAGAA GCCAGCGCCA CCGAGATCAT CCAGTGGGCC
GCCGACACGT TCGGCGACCG GCTGTGCCTG ACCGCGTCGA TGGCGGACGC CGTCATGGTG
GACCTGGTCT CGAAAGTAGT CCCGGGCATC GACGTGATCT TCCTGGACAC CGGCTACCAC
TTCCCGGAGA CGCTGGGGAC CCGCGACGCG GTCGCGCAGA CCTACCCGAT CAACCTGATC
ACGGTCACCC CCAGCCGGAC CGTAGCGGAA CAGGATCGCG ACCTCGGTCC CCGGCTGTAC
GCCCGCAACC CCGACCTCTG CTGCTACCTG CGCAAAGTAG AGCCGCTGCA GCGGGCGTTG
CAGTCCTACG ACGCCTGGCT GACCGGGCTG CGCCGCGACG AGGCGGTGAC CCGCCGCACC
GTGGGGGTCG TGCAGTGGGA CGCCCGCAAG AAGAAGATCA AAGTCAATCC GATCGCCCGC
TGGACCCAAG AGCAGGTGGA CTCCTACATC GCTGAGCACG GGGTGCTCGT CAACCCGCTG
CAGGACGACG GCTACCCCTC GATCGGGTGT GCGCCGTGCA CTCAGCGGGT GCCGGAAGGC
GCCGACCCCC GCAGCGGTCG CTGGGCGGGA ACAGGGAAAG TCGAATGCGG TCTCCACAGT
TGA
 
Protein sequence
MRPSLPPLLR RAPRRGVPPF HYDADRGGAA LNITADGAAF AAEAAARLEE ASATEIIQWA 
ADTFGDRLCL TASMADAVMV DLVSKVVPGI DVIFLDTGYH FPETLGTRDA VAQTYPINLI
TVTPSRTVAE QDRDLGPRLY ARNPDLCCYL RKVEPLQRAL QSYDAWLTGL RRDEAVTRRT
VGVVQWDARK KKIKVNPIAR WTQEQVDSYI AEHGVLVNPL QDDGYPSIGC APCTQRVPEG
ADPRSGRWAG TGKVECGLHS