Gene Tfu_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1888 
Symbol 
ID3579471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2212289 
End bp2213983 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content67% 
IMG OID637685580 
Productputative nitrite/sulphite reductase 
Protein accessionYP_289944 
Protein GI72162287 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCCG CACCCACACC GACCGGCCGT CCCGCCAGGA AGACGACGCG CCCGCGCCGC 
GGCGAGGGGC AGTGGGCTCT CGGCTACCGC GAGCCGCTCA ACAAGAACGA AGAGATCAAA
AAGAACGATG ATGGGCTCAA CGTCCGCAAG CGCATCATCG ACATCTACTC CAAACAGGGC
TTCGATTCCA TCGACCCTGC CGACCTGCGC GGACGATTCC GCTGGTACGG ACTCTACACC
CAGCGCGCCC CGGGGATCGA CGGCGGTAAG ACAGCGGTGC TGGAGCCCGA GGAGCTCGAC
GACCGCTACT TCATGATGCG GGTCCGCACC GACGGCGGAC AGCTCAACGT GGCGCAGCTC
CGCGTGCTCG CGGAAGTATC CACCGCCTAC GGCCGGGACA CCGCCGACAT CACCGACCGG
CAGAACATCC AGATGCACTG GGTGCGTATC GAGGACGTCC CCACCATCTG GGAGCGGCTG
GAAAGCGTGG GGCTCACCAC CACCGAAGCC TGCGGCGACA CCCCTCGCGG CCTGCTCGGC
TGCCCGCTGG CCGGGATCGC CGAAGACGAG ATCATCGACG CCACCCCGCA GCTCCGCCAA
ATCGTCGCCG ACCACATCGG CAGCCCGCTC TTCTCCAACC TGCCGCGCAA GTTCAAGACC
GCGATCGACG GGTGTGCCGT GCACTGCACC AACTACGAGG TCAACGACGT GGCTTTCGTC
GGCGTCATCG GACCCGACGG TACGCCCGGT TACGACCTGT TCGTCGGCGG CGGCCTGTCC
ACGAACCCGA TGTTCGCCCA GCGGCTCGGC GCGTTCGTCC GCCCCGAACA GGTCAGCGAA
GTGTGGGCGG GCGTCTGCTC CGTGTTCCGC GACTACGGCT ACCGCCGGCT CCGGCACCGC
GCCCGCATCA AGTTCCTCAT CAAAGACTGG GGTCCGCAGA AGTTCCGCGA AGTACTGGAG
AAGGAATACC TCGGCTACTC GCTGCCGGAC GGCCCCGAAC CGGTCCTCGA CCCGGGCACC
CGCCGCGACC ACGTGGGCAT CCACCGGCAG AAGGACGGCC GCTTCTTCGT GGGCTTCGCC
CCTCGGGTGG GCCGGGTCAG CGGCACCATC CTGGGACGGA TCGCCGACAT CGCTGAAGCG
CACGGCTCGA ACCGGGTGCG TACCACCGCC GACCAGAAGC TGGCGATCCT GGACATCACC
GAAGACCGGC TGGACTCGGT CGTGGCCGCG CTCGAAGCCG AAGATCTCCA GGTGAACCCC
AGCGTCTTCC GCCGGCAGAC CATGGCCTGC ACCGGCATCG AATACTGCAA GCTCGCCATC
GTCGAAACCA AGAACCGCGC GATGGCCCTC ATCGACGAGT TGGAGCGCCG CCTCCCCGAC
TTCACCGAAC CGCTCACCAT CAACGTCAAC GGCTGCCCGA ACGCCTGCGC CCGCACCCAG
ATCGCGGACA TCGGGTTGAA AGGCCAGCTC GTCACCGACG CCCACGGCAA CCAGGTGGAA
GGCTTCCAAA TCCACTTGGG CGGAGGACTG GGCCTGCAAG CCGGGTTCGG CCGCAAGGTG
CGCGGGCTGA AGACGACCGC CGCGGAACTC CCCGACTACA TCGAACGGGT AGTGCGCCGG
TTCGCGGAGC AGCGGCAGGC CGAAGAGACC TTCGCGGAAT GGGTGGCACG CGCAGACGAG
GCGGACTTGA AATGA
 
Protein sequence
MPSAPTPTGR PARKTTRPRR GEGQWALGYR EPLNKNEEIK KNDDGLNVRK RIIDIYSKQG 
FDSIDPADLR GRFRWYGLYT QRAPGIDGGK TAVLEPEELD DRYFMMRVRT DGGQLNVAQL
RVLAEVSTAY GRDTADITDR QNIQMHWVRI EDVPTIWERL ESVGLTTTEA CGDTPRGLLG
CPLAGIAEDE IIDATPQLRQ IVADHIGSPL FSNLPRKFKT AIDGCAVHCT NYEVNDVAFV
GVIGPDGTPG YDLFVGGGLS TNPMFAQRLG AFVRPEQVSE VWAGVCSVFR DYGYRRLRHR
ARIKFLIKDW GPQKFREVLE KEYLGYSLPD GPEPVLDPGT RRDHVGIHRQ KDGRFFVGFA
PRVGRVSGTI LGRIADIAEA HGSNRVRTTA DQKLAILDIT EDRLDSVVAA LEAEDLQVNP
SVFRRQTMAC TGIEYCKLAI VETKNRAMAL IDELERRLPD FTEPLTINVN GCPNACARTQ
IADIGLKGQL VTDAHGNQVE GFQIHLGGGL GLQAGFGRKV RGLKTTAAEL PDYIERVVRR
FAEQRQAEET FAEWVARADE ADLK