Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1888 |
Symbol | |
ID | 3579471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2212289 |
End bp | 2213983 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637685580 |
Product | putative nitrite/sulphite reductase |
Protein accession | YP_289944 |
Protein GI | 72162287 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCCG CACCCACACC GACCGGCCGT CCCGCCAGGA AGACGACGCG CCCGCGCCGC GGCGAGGGGC AGTGGGCTCT CGGCTACCGC GAGCCGCTCA ACAAGAACGA AGAGATCAAA AAGAACGATG ATGGGCTCAA CGTCCGCAAG CGCATCATCG ACATCTACTC CAAACAGGGC TTCGATTCCA TCGACCCTGC CGACCTGCGC GGACGATTCC GCTGGTACGG ACTCTACACC CAGCGCGCCC CGGGGATCGA CGGCGGTAAG ACAGCGGTGC TGGAGCCCGA GGAGCTCGAC GACCGCTACT TCATGATGCG GGTCCGCACC GACGGCGGAC AGCTCAACGT GGCGCAGCTC CGCGTGCTCG CGGAAGTATC CACCGCCTAC GGCCGGGACA CCGCCGACAT CACCGACCGG CAGAACATCC AGATGCACTG GGTGCGTATC GAGGACGTCC CCACCATCTG GGAGCGGCTG GAAAGCGTGG GGCTCACCAC CACCGAAGCC TGCGGCGACA CCCCTCGCGG CCTGCTCGGC TGCCCGCTGG CCGGGATCGC CGAAGACGAG ATCATCGACG CCACCCCGCA GCTCCGCCAA ATCGTCGCCG ACCACATCGG CAGCCCGCTC TTCTCCAACC TGCCGCGCAA GTTCAAGACC GCGATCGACG GGTGTGCCGT GCACTGCACC AACTACGAGG TCAACGACGT GGCTTTCGTC GGCGTCATCG GACCCGACGG TACGCCCGGT TACGACCTGT TCGTCGGCGG CGGCCTGTCC ACGAACCCGA TGTTCGCCCA GCGGCTCGGC GCGTTCGTCC GCCCCGAACA GGTCAGCGAA GTGTGGGCGG GCGTCTGCTC CGTGTTCCGC GACTACGGCT ACCGCCGGCT CCGGCACCGC GCCCGCATCA AGTTCCTCAT CAAAGACTGG GGTCCGCAGA AGTTCCGCGA AGTACTGGAG AAGGAATACC TCGGCTACTC GCTGCCGGAC GGCCCCGAAC CGGTCCTCGA CCCGGGCACC CGCCGCGACC ACGTGGGCAT CCACCGGCAG AAGGACGGCC GCTTCTTCGT GGGCTTCGCC CCTCGGGTGG GCCGGGTCAG CGGCACCATC CTGGGACGGA TCGCCGACAT CGCTGAAGCG CACGGCTCGA ACCGGGTGCG TACCACCGCC GACCAGAAGC TGGCGATCCT GGACATCACC GAAGACCGGC TGGACTCGGT CGTGGCCGCG CTCGAAGCCG AAGATCTCCA GGTGAACCCC AGCGTCTTCC GCCGGCAGAC CATGGCCTGC ACCGGCATCG AATACTGCAA GCTCGCCATC GTCGAAACCA AGAACCGCGC GATGGCCCTC ATCGACGAGT TGGAGCGCCG CCTCCCCGAC TTCACCGAAC CGCTCACCAT CAACGTCAAC GGCTGCCCGA ACGCCTGCGC CCGCACCCAG ATCGCGGACA TCGGGTTGAA AGGCCAGCTC GTCACCGACG CCCACGGCAA CCAGGTGGAA GGCTTCCAAA TCCACTTGGG CGGAGGACTG GGCCTGCAAG CCGGGTTCGG CCGCAAGGTG CGCGGGCTGA AGACGACCGC CGCGGAACTC CCCGACTACA TCGAACGGGT AGTGCGCCGG TTCGCGGAGC AGCGGCAGGC CGAAGAGACC TTCGCGGAAT GGGTGGCACG CGCAGACGAG GCGGACTTGA AATGA
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Protein sequence | MPSAPTPTGR PARKTTRPRR GEGQWALGYR EPLNKNEEIK KNDDGLNVRK RIIDIYSKQG FDSIDPADLR GRFRWYGLYT QRAPGIDGGK TAVLEPEELD DRYFMMRVRT DGGQLNVAQL RVLAEVSTAY GRDTADITDR QNIQMHWVRI EDVPTIWERL ESVGLTTTEA CGDTPRGLLG CPLAGIAEDE IIDATPQLRQ IVADHIGSPL FSNLPRKFKT AIDGCAVHCT NYEVNDVAFV GVIGPDGTPG YDLFVGGGLS TNPMFAQRLG AFVRPEQVSE VWAGVCSVFR DYGYRRLRHR ARIKFLIKDW GPQKFREVLE KEYLGYSLPD GPEPVLDPGT RRDHVGIHRQ KDGRFFVGFA PRVGRVSGTI LGRIADIAEA HGSNRVRTTA DQKLAILDIT EDRLDSVVAA LEAEDLQVNP SVFRRQTMAC TGIEYCKLAI VETKNRAMAL IDELERRLPD FTEPLTINVN GCPNACARTQ IADIGLKGQL VTDAHGNQVE GFQIHLGGGL GLQAGFGRKV RGLKTTAAEL PDYIERVVRR FAEQRQAEET FAEWVARADE ADLK
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