Gene Tfu_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1876 
Symbol 
ID3579459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2199423 
End bp2200436 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID637685568 
Productputative oxidoreductase 
Protein accessionYP_289932 
Protein GI72162275 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0365812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAA CCGCACGCGA GTTCCACCTG ATCGCCCGGC CGCAGGGCGA GCCCGCGGTG 
ACCGACTTCG CGCTCGTTAC CCGCACCCTT CCTGATCCCG GTCCCGGGGA GCTGCTGGTC
CGCAACCTGG TGCTCTCTGT CGACCCCTAC ATGCGGGGGA AGATGTCCGG GGTACGGACC
TACACCGACC CTTACGAGCT CAACGCCCCC ATGGAAGGCG GCGCCGTGGG CGTGGTCGAA
GCCAGCACCG ATCCGGCGGT GCCGACGGGG ACACTGGTGG TGCACAACGC GGGCTGGCGG
TCGCACGCCC TGCTGCCCGC CTCCCGAGTC CGTCCCCTCC CCGCCGACAG TCCGGTGGAC
CCCAGCGTCT ACCTGGGAGC GCTGGGGATG CCCGGTCTGA CCGCCTATGT GGGCCTGCGG
CACAAAGCCG GGATACGGGA AGGCGACACC GTGTTCGTCT CCGGCGCGGC CGGTGCCGTG
GGCAGCATGG TCGGCCAGCT CGCCGCGCTG TACGGGGCTC GGCGGGTGAT CGGCAGCGCC
GGTTCCCCGG AGAAGGTCGC CTACCTGCGC GACGAACTGG GCTTCGACGC GGCTTTCGAC
TACCGGGCCG CCCCGGTGCG CGAACAACTG GCCGACGCTG CTCCGGACGG CATCGACGTG
TACTTCGACA ATGTGGGCGG CGACCACTTG GAGGCGGCAA TCGCCTGCGC CAACGACTTC
GCGCGGTTTG CGATCTGCGG GGCGATCTCG GGTTACAACG CGACCAGCGC GCCGCGAGCG
CCGCGCAACC TGTTCCAGAT CGTCACCAAG CGGCTGACCC TGCGCGGCTT CATCGTGAGC
GACGAACCCC ACCTCGCTGA GGAGTTCCAG CGCGAGGTCG CCCCCGCCGT CGCCGACGGA
CGGATCAAAG TCCGCGAGAC GGTCGTGGAA GGCCTGGAGC GCACGCCGGA GGCGTTCATC
TCGATGCTGC GCGGCGGCAA CATCGGCAAG ATGGTGGTCC GCGTCGCGGA GTAG
 
Protein sequence
MPTTAREFHL IARPQGEPAV TDFALVTRTL PDPGPGELLV RNLVLSVDPY MRGKMSGVRT 
YTDPYELNAP MEGGAVGVVE ASTDPAVPTG TLVVHNAGWR SHALLPASRV RPLPADSPVD
PSVYLGALGM PGLTAYVGLR HKAGIREGDT VFVSGAAGAV GSMVGQLAAL YGARRVIGSA
GSPEKVAYLR DELGFDAAFD YRAAPVREQL ADAAPDGIDV YFDNVGGDHL EAAIACANDF
ARFAICGAIS GYNATSAPRA PRNLFQIVTK RLTLRGFIVS DEPHLAEEFQ REVAPAVADG
RIKVRETVVE GLERTPEAFI SMLRGGNIGK MVVRVAE