| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1872 |
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| Symbol | |
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| ID | 3579551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2194843 |
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| End bp | 2196024 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637685564 |
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| Product | isochorismate synthase |
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| Protein accession | YP_289928 |
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| Protein GI | 72162271 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.290402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGAC AGTGCGTCGC CACCCCGGCC GCGACCGTCA CTGAACTCCT GGACGCCTAC
CGTCCCCGGG ACTTCTTCTT CACCTCCCCT TCCGGGTCGC TGCTCGGGCA AGGCGTCCTG
ACCACCGTGA CCGGGGTCGA CGACCTGTCC GATGCACTGC ACGCCACCGC CGCCGAGCCG
GGACGGCACG CCGTCGCGGT CGGAGCGCTC CCCTTCAACC GGACCGCACC CGCTCGCCTC
GTCATCCCCG CAACCGTGCA GCGCGGCCCC GCGATCATGC CCGGCACCGG CGCCACCCGC
GCGCGGCGCC CCCGGAACGG CACCTGGACC GCCACCCCCG TTCCCGACCC CGCCGCACAC
ACCGCCGCGG TCAAACGCGC CGTCGCCCTC CTGGCCAGCC CAGACAGCAC CCGGCTGCGC
AAAGTTGTCC TGGCCCGCTG CCTCCGCCTG ACCAGCAGCC ACGACGTGGA CGTCGCCGCG
GTACTCGCCA ACCTCGCGCA AGCCAACCCC GGCGGGTTCA CCTTCGCCGC CGACCTGCCT
GCCCCCGACA GCCGTCCGCG CACCCTCGTC GGGGCCAGCC CGGAACTGCT CGTCGCCAAA
CACGGCCGCG CCGTGGTGTC CCGCCCGCTC GCGGGCTCCC GCCCCCGCGA CACCGACCCG
ACCCGGGACC GGGAACGCGG CGCTGCCCTG CTCGCCTCCG CCAAAGACCG CGCCGAACAC
GCCGTCGTCG TGGAAGCCGT CGTCGAAGCG CTCCGCCCCT ACTGCCGCTC CCTGGATGTC
CCCGACGAAC CCCAGCCGGT CACCACTCCC ACCATGTGGC ACCTGGCCAC CCAGGTCACC
GGCGAACTGC GCGACCCGCG CACCCCCGTC CACGTGCTGG CCCAGGCCCT CCACCCCACC
CCCGCGGTCT GCGGCTATCC CACCGACCAG GCCTATGCGG CCATCGCCGA ACTCGAACCG
TTCGACCGCG GCTTCTACAC CGGGGCTGTC GGCTACACCG ACGCCGCCGG CGACGGCGAA
TGGGTGGTGA CCATCCGCTG CGCCGACATC CACGGCGCCA CCGCCGAACT GTTTGCGGGC
GGCGGCATCA TGCCCGACTC CGACCCCGAG GCCGAACTCG CGGAAACCAC CGCCAAATTC
CGCACCCTGC TGCTCGCCCT CGGAGCCGAC CAGCTCCGGT AA
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| Protein sequence | MPRQCVATPA ATVTELLDAY RPRDFFFTSP SGSLLGQGVL TTVTGVDDLS DALHATAAEP
GRHAVAVGAL PFNRTAPARL VIPATVQRGP AIMPGTGATR ARRPRNGTWT ATPVPDPAAH
TAAVKRAVAL LASPDSTRLR KVVLARCLRL TSSHDVDVAA VLANLAQANP GGFTFAADLP
APDSRPRTLV GASPELLVAK HGRAVVSRPL AGSRPRDTDP TRDRERGAAL LASAKDRAEH
AVVVEAVVEA LRPYCRSLDV PDEPQPVTTP TMWHLATQVT GELRDPRTPV HVLAQALHPT
PAVCGYPTDQ AYAAIAELEP FDRGFYTGAV GYTDAAGDGE WVVTIRCADI HGATAELFAG
GGIMPDSDPE AELAETTAKF RTLLLALGAD QLR
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