Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1853 |
Symbol | |
ID | 3579436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2160092 |
End bp | 2161345 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637685545 |
Product | putative transporter |
Protein accession | YP_289909 |
Protein GI | 72162252 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.117056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGAGA ACCAGCACGA ATTCCGTCTG CCCGTTTCCG TCAAGCTGCT CCGGGAGCGA ACCTCCCGGC TCCGTCGCGC CCGCATCGCC GTGGTCGCCC ACTTCTTCAT CGCGGGCATG ATCATCGCGG TCTGGGCATC CCGTATCCCC GAGGTCAAGC AGCGCGCCGG CCTCAACGAC GGCGAGCTGA GCCTGGCCCT GCTCGGTATG GCGGTCGGCT CGCTGGCCGC CATGCAACTG GCCGGGCGCA TGGTGGACCG CTACGGCAGC GGCGCAGTGA TGCCGCCCGC AGCGCTGCTT GCCTCCCTCA CCCTCATCGG CCCAGGATTC GCCAACTCCC TGCCCTACCT GTTCACCGCA CTGGTCGCGG TCGGGCTCGG CAGCGGACTC CTGGGCGTGC CGATGAACGT GCACGCGGCC CGGGTAGAGC GGCGCTACGG ACGCCCCATC ATGGCCTCCT TCCACGCCGC TTTCTCCATC GGCGGCTTCA CCGGAGCAGC CGTGGGCGGC GCCACCGCCT ACTTCGACGT GGCCGCGCCG CTCACCTTCG CTGCCGTGGC GCTGGCCATG GCAGGGCTCG CCCTTGGGGT GCGCCCGTGG CTGCTGCGGG GCCGCGACGT GGACACCGTG GCCGCTACCC GCCCCACCCC AGCCCCACCG CGACCGCAAC GGGGGATACC GTGGCGGATC GTCCTGTTCG GGGTGGCAGC GTTCTGCTGC ATGCTCGCCG AAGGCTCCGT CACCGACTGG GCCGCGGTCT ACCTGCACGA CGCACGGGGC GCGTCCGGGG CCGTAGCCGC CCTCGGCTTC TCCGCATTCT CCGCCCTCAT GGCGGCGGGC CGCCTGGTCG GCGACCGGCT CACCGCCACC CTGGGCGCAG TGGCGATCGT GCGCGGCGGC GCGCTGGTGG CCACCGCAGG ACTGACCCTG ATCCTGGCCA CCCCGTGGGC AGGGACCGGG ATCGCCGGGT TCGCTCTCAT GGGTGCCGGA CTGTCCTGCA TCATCCCGCA CGTGTTCGGT GCGGCCGTGG AGTACGACCC GCGGCGCGCG GGCCGCAACC TCAGCTTCGT CTCCGGCATG GGCCAAGTGG GCCTGTTGAG CGGCCCGGTC GCGATCGGCG CGGTCGCGCA CACCATCGAC ATCGCTATGG CGCTGGTGGT CCCAGCCGTG CTGTGCCTGG GGATCGCCGT CGTGGCGCCC GCGCTGCGCG GAGCAGTCGC CACGCGCAAC GCTTCCGTGG ACGCTACGGC ATGA
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Protein sequence | MAENQHEFRL PVSVKLLRER TSRLRRARIA VVAHFFIAGM IIAVWASRIP EVKQRAGLND GELSLALLGM AVGSLAAMQL AGRMVDRYGS GAVMPPAALL ASLTLIGPGF ANSLPYLFTA LVAVGLGSGL LGVPMNVHAA RVERRYGRPI MASFHAAFSI GGFTGAAVGG ATAYFDVAAP LTFAAVALAM AGLALGVRPW LLRGRDVDTV AATRPTPAPP RPQRGIPWRI VLFGVAAFCC MLAEGSVTDW AAVYLHDARG ASGAVAALGF SAFSALMAAG RLVGDRLTAT LGAVAIVRGG ALVATAGLTL ILATPWAGTG IAGFALMGAG LSCIIPHVFG AAVEYDPRRA GRNLSFVSGM GQVGLLSGPV AIGAVAHTID IAMALVVPAV LCLGIAVVAP ALRGAVATRN ASVDATA
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