| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1848 |
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| Symbol | |
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| ID | 3579431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2154975 |
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| End bp | 2157500 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685540 |
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| Product | putative ABC transporter integral membrane protein |
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| Protein accession | YP_289904 |
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| Protein GI | 72162247 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.779452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCGCA CTACACTGGC TGGGCTGCGT TTCGCGTGGC GGCGGCTGAT AGCCACCTCT
CTCGCCATCA TCCTGGGTGT CGTCTTCGTC ACCGGCACCC TCGTCTTCGG CGACTCCCTG
CACCGCAGTT TCACGGTGCA GGCAATGGGC TCCATGGACC GGGTCGACGT CATCGCCCTC
GCCACGGGAA CTTCGGCCGA CGAAGACGAG CCACCGCTGC TGGACGAGTC GGCGTTGCGC
CGCGTCCGCG AGCTTCCCGA AGTCGCTGCA GCTACGGGAG CCGTCATCGG ATCCGCGCCG
CTGCTGGACG AGCAAGGGCG CGCCCTGGGC ACGGTTCCCA CGGTGGGCAT CTCTGTGGGG
GGCGACGTCC CGCGTTACGA CGCGGTTGAA GGACGCCTCC CCAGCACCGC AAACGAAGTG
GCGCTCGCCA CAGCCACCGC GGCGAGCAGC GGTTTCGAGG TAGGCGACAC GGTCACCGTG
CTCGACCCGG AAGGCACCAA ACACGACTTC ACAGTGACCG GGGTGATCGA CTTCGGACCG
GAGACCTCGA TCAGCTACCG GGGCGCGGTC GCCTTCACCC TCGACACCGC CCAGCGGATG
ACCGGAGTTA CTGGATACCG GGAGATCTAC GTGCGTGCCG CCGAAGGGGT GCCCGCGGAT
CAAGCGGAAT CCGCGGTGGC CGACGCCCTA GGCGCGGACG CTGACGTGTA CACCGGCCGC
GAGTACGGGG AGAAACTGGC GAGCACAGCG GGAGTCCAGG CGAGAATCTT CACCACGGCA
CTGCTGCTGT TCGCGGCCGT TTCGGTGTTC GTTGCCGCGC TGGTGATCCA CAACACGTTC
ACGATCCTGG TGGCCCAACG GCAGCGGGAA CTGGCGCTGC TGCGCTGCGT GGGCGCCACC
CGCGGCCAGG TCTTCCGCGC TGTCCTGGTG GAAGCGCTCG TGGTGGGGAT GGCTGCCTCC
GCGGTCGGGG TCGTCGCGGG GATCGGGCTC GGTTGGGGCG CATTCGCCCT CGGAGAGCGC
TTCATCACCG ATTCGACGAC GTCGAGCCCG CTGGTCATCA CCGCTGTCCC GATTGTGGTG
GGCCTGCTCG TCGGGGTGCT GTCCAGTGTG GCATCCGCGC TGCACCCCGC GGTGCGCGCC
ACCCGCGTCC CCCCGCTGGC TGCCCTGCGG AGCAGTGCGC TGACCGAGGA GCAGAACCGG
CGTGTCGGCT GGCTGCGGGC CGTTACCGGC TCGCTGTTCC TCCTCGGCTC GGCAGCGCTG
CTGACGGTGG CGCTGCGCTT GGAGCCGAAC CAGATCGCCA TGATCCTGGT GGTGGCCTCA
GGCCTGGTGT GCTTCGTCGG CGTGGCAGTG TGGGCGCCGT TGATCGTGCG TGGTGTTATC
ACCGTCCTGG GCTGGCTGGT ACGGCGTTTC GGGGTGCCTG CGTCGCTAGC CGTAGACAAT
GCGCTGCGGG CGCCGCGGAG GGCAGCGGCC GCGATGATCG CGTTGACGGT CGGCACCACC
CTGATCACCG GCTACTCGGT GGTCAACGCT TCGATGCTCG ACACGCTGGA GACCCGCCTC
GATGAGCAGT TCCCCGTCGA CTACATGATG GTCACCCAGC TCGACCCGGA CCAGGCAGGC
CAGTACCAGG AGCTGCCCGC TGAAGTCGTG GCGGAGCTGC GGTCCTCTCC GGCGATCTCC
ACCGTGGTCA CCCAGCGCAC CGAACAGGAC GACAACAACA CGCCGGTGAC GGCCTTCCCG
CACGCGAAGC TCGGCACGGA CATCGGGGAA GCACAGGAAG GGGACCTGGC TGACGTGGTC
CCGGGAACGG CTGCGATCTC GGAGAACCTC GCCCAGAAGC ACGAGGTCGG CATCGGGGAC
TCGCTGTCCT TGCACACCGA GCACGGCGAC CTGTCCCCCA CGGTGGTGGC CATCCTGCCT
GCCGGCGGCG GAATTCTCGG TGTGCTCGTC TCCGTCGACG ACTTCGAGCG GCTCTTCCCG
GACGTGCCGG ACTCCCAGGC CTACATCACG GCTGCCGCGG ACGCCTCCCC CAAGGAAGTG
ACCGACGCGG TCAACGCGGC GATCGCTGAC TACCCGCAAG TGCAGGTCGC CAACGTCTCC
CAGATGAAGC TGGAGTTCGA AGAACTCCTC AACTCCGTGT TCCTCGTCAT CCTCGCCTTG
CTAGGGCTGG CGGTCATCAT CGCGGTGTTC GGGGTCGCCA ACACGCTGGC GCTGTCCGTG
CTGGAGCGGA GCCGCGAGTC GGCGCTGCTG CGCGCGCTGG GGCTGACTCG GCCGCAGTTG
CGTCGCATGC TCGCCGTGGA GGCAGTGCTG CTCTCCGTGA CGGGCGGTGC GCTGGGGATC
GCCCTGGGCC TGCTGTTCGG GTGGGCCGCG GGGAAAGTCA CCCTCATGGG CTTGATCTTC
ACGGTCCCTG TCGCGGAGAT CGCTGGCCTG GTGGCGGTGG CGGTCGTGGC TGGCCTGCTT
GCCGCAGTGC TTCCCGCGCA CCGCGCCTCC CGGGTCTCGG TCACCGAGCA GTTGGCTGCC
CAGTAG
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| Protein sequence | MLRTTLAGLR FAWRRLIATS LAIILGVVFV TGTLVFGDSL HRSFTVQAMG SMDRVDVIAL
ATGTSADEDE PPLLDESALR RVRELPEVAA ATGAVIGSAP LLDEQGRALG TVPTVGISVG
GDVPRYDAVE GRLPSTANEV ALATATAASS GFEVGDTVTV LDPEGTKHDF TVTGVIDFGP
ETSISYRGAV AFTLDTAQRM TGVTGYREIY VRAAEGVPAD QAESAVADAL GADADVYTGR
EYGEKLASTA GVQARIFTTA LLLFAAVSVF VAALVIHNTF TILVAQRQRE LALLRCVGAT
RGQVFRAVLV EALVVGMAAS AVGVVAGIGL GWGAFALGER FITDSTTSSP LVITAVPIVV
GLLVGVLSSV ASALHPAVRA TRVPPLAALR SSALTEEQNR RVGWLRAVTG SLFLLGSAAL
LTVALRLEPN QIAMILVVAS GLVCFVGVAV WAPLIVRGVI TVLGWLVRRF GVPASLAVDN
ALRAPRRAAA AMIALTVGTT LITGYSVVNA SMLDTLETRL DEQFPVDYMM VTQLDPDQAG
QYQELPAEVV AELRSSPAIS TVVTQRTEQD DNNTPVTAFP HAKLGTDIGE AQEGDLADVV
PGTAAISENL AQKHEVGIGD SLSLHTEHGD LSPTVVAILP AGGGILGVLV SVDDFERLFP
DVPDSQAYIT AAADASPKEV TDAVNAAIAD YPQVQVANVS QMKLEFEELL NSVFLVILAL
LGLAVIIAVF GVANTLALSV LERSRESALL RALGLTRPQL RRMLAVEAVL LSVTGGALGI
ALGLLFGWAA GKVTLMGLIF TVPVAEIAGL VAVAVVAGLL AAVLPAHRAS RVSVTEQLAA
Q
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