| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1843 |
|---|
| Symbol | |
|---|
| ID | 3579426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2149581 |
|---|
| End bp | 2150285 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637685535 |
|---|
| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
|---|
| Protein accession | YP_289899 |
|---|
| Protein GI | 72162242 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.136671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCT CGGTTCTGGT CACCGGTGGC AGCCGCGGAA TCGGTCTGGC CATCGCCAGG
GAGCTCAAGG AAGCGGGCGA CGACGTCGCG GTGACCTACC GCACCGGGCA GCCCCCGGAA
GGACTGTTCG GGGTCCAATG CGACATCACC GACAGCGCCC AGGTGGACGC CGCTTTCAAG
CAGGTGGAGG AGGCCCACGG CCCGGTCGAG GTCCTGGTCG CCAACGCGGG CATCAACAAG
GACCAGTTGC TGGCCCTCAT GAGCGAAGAA GACTTCAACG CGGTGCTCGA CACCAACCTG
ACCGGCGCGT TCCGGGTGGC CAAGCGCGCA GTGCGCGGCA TGATGCGTAA ACGCAGTGGC
CGCATCATCC TCATCTCCTC CGTGGTCGGC CTGGCCGGGT CGCCGGGACA GGCGAACTAC
GCCGCATCCA AGGCCGGGCT CGTGGGCTTC GCCCGCTCGC TCGCCCGGGA ACTCGGGTCC
CGCAACATCA CCGTCAACGT GGTCGCCCCC GGCTACATCG AGACCGACAT GACCGCGGCG
CTGCCCGAGA AACGCCAGGA GGAGATCAAG AAGAACGTGC CGCTGGGCCG GTACGGCACC
ACCGCCGACG TGGCGAAAGC CGTGCGGTTC CTCGCCAGCG AGGACGCCGG CTACATCACG
GGTGCGGTCA TCCCCGTCGA CGGCGGCCTC GGCATGGGCC ACTGA
|
|---|
| Protein sequence | MSRSVLVTGG SRGIGLAIAR ELKEAGDDVA VTYRTGQPPE GLFGVQCDIT DSAQVDAAFK
QVEEAHGPVE VLVANAGINK DQLLALMSEE DFNAVLDTNL TGAFRVAKRA VRGMMRKRSG
RIILISSVVG LAGSPGQANY AASKAGLVGF ARSLARELGS RNITVNVVAP GYIETDMTAA
LPEKRQEEIK KNVPLGRYGT TADVAKAVRF LASEDAGYIT GAVIPVDGGL GMGH
|
|---|
| |