| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1822 |
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| Symbol | |
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| ID | 3579113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2124304 |
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| End bp | 2125329 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685514 |
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| Product | oligopeptide transport integral membrane protein |
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| Protein accession | YP_289878 |
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| Protein GI | 72162221 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.661927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC CGTTGGACGC GCCTGAATCG GCGCAGCACG CCGAACCCGA GGCCATCGCC
CAAGGGCGGC GTGACATCGC GAGTCGCTCC CTCACCCAGA TCGCCTGGCG GAGGCTACGC
CAAGACCGGG TCGCTCTGGG CGGAGGCATC GTCGTTCTCC TGCTGATCCT GGTCGCGATC
TTCGCGCCGC TGCTCACCCA CTGGTTCGGA CATCCGCCCA ACCAGTTCCA CCAAGACCTC
ATCGACCCGG CCACCCAGGG CGTCCTCAAA AACCCCAACG ACCCGTGGAG CGGGATCGAC
CCGACCGGCG GCATGAGCAA AGAACACCTG CTCGGCGTGG AACCGGTCAA CGGGCGTGAC
CTGTTCAGCC GGATCGTCTA CGGGGCGCGC ATCTCCCTGC TCGTCGCCTT CCTGTCCACC
CTGCTGTGCG TCACCATCGG CACCGTGCTC GGCATCCTCG CCGGCTACCT CGGCGGCTGG
GTGGACACCG TGATCAGCCG CGCCATGGAC ATCTTCCTCG CCTTCCCGCT GCTGCTGTTC
GCGATCGCCC TGGCCGGTGT CATCCCCGAC GAAGCGTTCG GTCTCAGCGA CAACGCCCTC
CGCATCGCCG TGCTCGTGTT CATCATCGGC TTCTTCAGCT GGCCCTACAT CGGCCGGATC
GTGCGAGGGC AGACCCTCAG CCTGCGCGAA CGCGAATTCG TGGAAGCAGC CCGCTCCATG
GGCGCAGGTA CCGGGCACAT CATCTTCCGC GAAATCCTGC CCAACCTGGT GGCGCCGATC
CTCGTCTACG CGACCCTGCT GATCCCCACC AACATCCTCT TCGAAGCGGC CCTGTCCTTC
CTCGGCGTCG GTGTCAACCC GCCCACCCCC ACCTGGGGCC ACATGCTCTC CGAATCCCTC
GACTACTACG CGGTCGCCCC CCACTTCGTG ATCATCCCCG GACTTGCGAT CTTCATCACG
GTCCTCGCGT TCAACCTCTT CGGTGACGGG CTCCGTGATG CCTTCGACCC CAGGTCCACA
GACTGA
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| Protein sequence | MTAPLDAPES AQHAEPEAIA QGRRDIASRS LTQIAWRRLR QDRVALGGGI VVLLLILVAI
FAPLLTHWFG HPPNQFHQDL IDPATQGVLK NPNDPWSGID PTGGMSKEHL LGVEPVNGRD
LFSRIVYGAR ISLLVAFLST LLCVTIGTVL GILAGYLGGW VDTVISRAMD IFLAFPLLLF
AIALAGVIPD EAFGLSDNAL RIAVLVFIIG FFSWPYIGRI VRGQTLSLRE REFVEAARSM
GAGTGHIIFR EILPNLVAPI LVYATLLIPT NILFEAALSF LGVGVNPPTP TWGHMLSESL
DYYAVAPHFV IIPGLAIFIT VLAFNLFGDG LRDAFDPRST D
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