| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1820 |
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| Symbol | |
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| ID | 3579111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2121363 |
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| End bp | 2122376 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637685512 |
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| Product | putative peptide transport system permease protein |
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| Protein accession | YP_289876 |
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| Protein GI | 72162219 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.756462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAT ACATCCTCCG GCGCCTGGGC GCGAGTGTGA TCCTGCTCCT CGTCGTGACC
CTGATGACGT TCGTCATCTT CTACGTGGTG CCACGACTCG CCGGGCGGAC CACTGAACAA
CTCGCCACCA TGTACGTGGG CCGCGCCCCC ACCGAAGCCG CCATCCAAGC CACCATCAAA
CGGCTGAACC TGGACCAGCC GCTGATCATC CAGTTCTGGG AGTTCATCAA AGGCATCGTC
CTCGGAGCCG ACTACACCTT CGGCAACGAC GTCGTGCACT GCGCGGCCCC CTGCTTCGGC
TACTCCTTCC AGACCTACCA GGAGGTCTTC CCCGCCATCC TCGAGCGGCT GCCGATCACG
TTCTCCCTCG GCCTGGGCGC CGCGGTGCTC TGGCTGGTCG GCGGGGTCGC CGTCGGCGTC
ATCTCAGCCG TCAAAAAAGG CAGCATCTTC GACCGGATCT CCATGGGCCT GGCCCTGGGC
GCAGTCTCCC TCCCCATCTT CTTCACCGGC CAGCTCGCCT TGGCCTTCCT CGTGCACGAC
TGGGGCCTGT TCCCCAACGC CCGGTACACG CCGTTCACCG AAGACCCCAT CGCCTGGGCC
TCCGGACTGC TGCTGCCGTG GCTGACCCTG GCGTTCCTGC ACGCCGCACA GTATGCGCGC
CAGACCCGCG CCGGCATGCT GGAAACCATG GGAGAGGACT ACATCCGCAC CGCCCGAGCC
AAAGGCCTCA AAGAAAGCCG TGTCATCCTC AAACACGGCC TGCGCCCCAC GCTCACCCCG
ATCCTGACCA TCTTCGGTCT GGACATCGGA CTGGTGCTCG GCGGCGCAGT ACTCACCGAA
CAGGTGTACT CGCTCAACGG CATTGGACGG TTCGCGGTCA CCGCGATCGT GCAGAGCGAC
CTGCCGGTCA TCCTCGGCGT CACCCTGTTC GGCGCGTTCT TCATCGTCCT GTGCAACCTG
GCCGTGGACC TGCTCTACCC CCTGGTCGAC CCCAGGGTGC GTACGGCCCG CTGA
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| Protein sequence | MLRYILRRLG ASVILLLVVT LMTFVIFYVV PRLAGRTTEQ LATMYVGRAP TEAAIQATIK
RLNLDQPLII QFWEFIKGIV LGADYTFGND VVHCAAPCFG YSFQTYQEVF PAILERLPIT
FSLGLGAAVL WLVGGVAVGV ISAVKKGSIF DRISMGLALG AVSLPIFFTG QLALAFLVHD
WGLFPNARYT PFTEDPIAWA SGLLLPWLTL AFLHAAQYAR QTRAGMLETM GEDYIRTARA
KGLKESRVIL KHGLRPTLTP ILTIFGLDIG LVLGGAVLTE QVYSLNGIGR FAVTAIVQSD
LPVILGVTLF GAFFIVLCNL AVDLLYPLVD PRVRTAR
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