Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1783 |
Symbol | |
ID | 3580463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2084498 |
End bp | 2085292 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685477 |
Product | ABC-type branched-chain amino acid transport systems ATPase component |
Protein accession | YP_289841 |
Protein GI | 72162184 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0473168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCTA CCGCACCCTC CCCCCTGATG GAGGTCGAGG GGGTAACCGT CCGATTCGGA GGCCTCGCCG CGCTCTCCGA TGTCGGACTG ACGATCGCCC CCCAGAGCGT GACTGGCCTC ATCGGCCCGA ACGGAGCCGG TAAAACCACG CTGTTCAACG TGATAACCGG CGTGGTGAGA CCCCAGCGCG GCACGATCAC CTTCAAAGGG CGCCCCCTGC GCAACCATCG TCCCCACCAG CTTGCACGCC TGGGAATCGC CCGCACCTTC CAAGGCCTCA ACCTCTTCGA GAGGATGACG GTCCTGGACA ACGTGATCGT CGGCGCCGAC CCGCTGGGCC GCTCCCGACT CCCCGGCATG CTCACCGGAC TCGGCAGCTA CCAGCGCGAC GAACGGGAGC TCACCGACCG GGCCATGGCC GTGCTCGAAG AGTTCGGGAT CGCCGACGTC GCCCACGCCT ACCCCTCGAC CCTCCCCTAC GGACTGCAGA AACGCGTGGC CCTGGCCCGC GCCCTCGTCG CCGAACCTGA ACTGCTGCTC ATGGACGAAC CCGCCAGCGG CCTGTCCGGC GCGGACATGG CCGACCTGGC CGCCACGATC CGGCGGTGCA GCCAAACCAT GGGCGTCGTC CTCGTCGAAC ACCACATGGA CCTGGTCATG GACGTGTGCG ACCACATCGT CGTCCTCAAC TTCGGCCAGG TCATCTGCTC CGGTCCGCCG TCCGTCGTCC AAGCAGACCC CGCGGTTGCG GAGGCCTACC TGGGCACTCC GGTGCAGGAG GCTGCCGGTG AGTGA
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Protein sequence | MAPTAPSPLM EVEGVTVRFG GLAALSDVGL TIAPQSVTGL IGPNGAGKTT LFNVITGVVR PQRGTITFKG RPLRNHRPHQ LARLGIARTF QGLNLFERMT VLDNVIVGAD PLGRSRLPGM LTGLGSYQRD ERELTDRAMA VLEEFGIADV AHAYPSTLPY GLQKRVALAR ALVAEPELLL MDEPASGLSG ADMADLAATI RRCSQTMGVV LVEHHMDLVM DVCDHIVVLN FGQVICSGPP SVVQADPAVA EAYLGTPVQE AAGE
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