| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1780 |
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| Symbol | |
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| ID | 3580460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2081830 |
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| End bp | 2082903 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637685474 |
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| Product | ABC transporter permease protein |
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| Protein accession | YP_289838 |
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| Protein GI | 72162181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCT CCCTGCGACG AGACGACCCG CCGACGGACG TGGTCGCCCC CAAGGCCGCG
CCGTCCACGC GCCCCCGGCC CCGGATCCGG CCCGTGCTGC TCACCCACCT GGCTGCGGCC
CTGCTCGCCC TCCTCGGGGT CGTCGCACTG ACCTTCCTGG TCGGCCCGAT CGAGCAGTTG
CGCATCGCCA AAGTGGGCTA CCTGATGCTC GCGATCGCCG GGCTGCAACT GCTGGTCGGC
GCCAGCGGGC AGATCTCCCT GGGGCACGGC GCTTTCATGT TCATCGGCGC CTACGCCACG
GCTCTGACCG TGCTGCACGC GCCGATGGTG CCGCTGGCAG CGATCATGGT GCTCACCGTA
GTCGTGGGCT GCCTCGCCGG GATCGTGGTC GGCGCGGCCA CAGCGCGGCT GCACGGCCCC
TACCTGGCCG GGGCCACCCT CGCCCTGGCG GTGGGTTTGC CTGCCCTGGC CCTGTACTTC
TCCGACGTTC TCGGCGGGTC CAACGGCCTG CTGTTCAAGA TGCGCGGCGC CCCGCCCGAG
CTCGCCGGGC TGGTCACCGA CAACCAGTGG AAGGCCTGGG TCATCTGGTT CACCGTGCTG
GTGGCCCTCG TCGTGCTGGC GACGCTGAGC CGGGGACGGC TGGGCCGGCG GCTACGCGCT
ATCCGCGACG ACGAGGCGGC CGCCGCCATG GCGGGCATCC CCGTGGGACG CACCAAAGTG
ACCGCGTTCG TCATCAGCGC CGGATGCGGG TCGCTGGCGG GAGCCTGCGA AGCCTATCTG
CTGGGCACCG CCACCCCCAG CTCGTTCTCG CTCGCACTGT CGCTGAGCCT GCTTGCCGCG
CTCGTCCTGG GCGGGCTGGG CAGCCTGTGG GGCGCGTTCT GGGGTGCGCT GGCCCTGGTC
TACCTGGAGC TGGCAGGAAA GGAGCTGGCA GACCTGCTCG GGTTGAGCAG CAGCGTGGCC
GACAACGTGC CGCTGGTGTT CTTCGGAACG CTGCTCATCG TCATCGTTAT GGCCTGGCCG
ATGGGCATCC ACGGCGCGCT CAGCCGCCTC AGCGGCGTGG TGCGCCGACG GTGA
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| Protein sequence | MTSSLRRDDP PTDVVAPKAA PSTRPRPRIR PVLLTHLAAA LLALLGVVAL TFLVGPIEQL
RIAKVGYLML AIAGLQLLVG ASGQISLGHG AFMFIGAYAT ALTVLHAPMV PLAAIMVLTV
VVGCLAGIVV GAATARLHGP YLAGATLALA VGLPALALYF SDVLGGSNGL LFKMRGAPPE
LAGLVTDNQW KAWVIWFTVL VALVVLATLS RGRLGRRLRA IRDDEAAAAM AGIPVGRTKV
TAFVISAGCG SLAGACEAYL LGTATPSSFS LALSLSLLAA LVLGGLGSLW GAFWGALALV
YLELAGKELA DLLGLSSSVA DNVPLVFFGT LLIVIVMAWP MGIHGALSRL SGVVRRR
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