Gene Tfu_1771 details

Gene Information

• Locus tag: Tfu_1771
• ID: 3581177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2068299
• End bp: 2070326
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637685465
• Product: transcriptional regulator
• Protein accession: YP_289829
• Protein GI: 72162172
• COG category: [K] Transcription
• COG ID: [COG2378] Predicted transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.193993
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCAGA GCAAGACCGA ACGGCAGCTC AATCTGGTGA TCTGCCTGCT GGCCACCAGG 
CGTTTCCTCA GTGCCCAAGA GATTCGGGCG ACCGTCCACG GCTACGGGGA CGTCGAAAGC 
GACACGGCCT TTAAACGCAT GTTTGAGCGC GACAAAAAAG AATTGCGCGA CGCAGGGATT 
CCGATCATCA CCGGCCGCCA CGATCCGCTC AGCGACGAAG ACGGCTACCG CATCGCCCGC 
GACGACTACG AACTCCCCCC AATCGACCTG CGCCCCGACG AGGCCGCAGT ACTCGGCCTG 
GCCGCCCGCG CCTGGCGGCA CGCTGTCCTC GGCGAGGCCG CCGCCAACGC CCTGCTCAAA 
CTGCGCAGCG TCGGAGTGCC TGTGGACGCT GCGGCACTGC CCGCGGTCAC CTCGGTTCTC 
GGCGCCGACG AGCCCGCGTT CCCCTCGGTG TGGCAGGCGG TTCGGGACCG CCGCCCCATC 
AGCTTCGACT ACCGCAAACC CGGAGAGGAC ACGCCACAAC GCCGGGAGCT TGAACCGTGG 
GGGGTCGCCA ACGTCGCCGG ACACTGGTAT GTCGCCGGCT ACGACCGGGA CCGCCGTGCC 
CGCCGCGTCT TCCGTCTCAG CCGGATCGTC GGCGACGTGC AGATCCACAC CAGCGCTCCC 
CCGGTGCAAG TGCCGAAGGA TGTGGACGTG CGTTCCCTGA TCAACGCGCG CCCGCCCGAA 
CCCGAGCAGG TAGCAGTGCT GGAGGCGCGC ACCGACGCCG CCCACGCGCT GCGCCGCGCC 
GCCCGGCGCA TCGTCGCGGG GGAGCGCACC GGCGGCACCG GATGGGACGT GGTGGAGTAC 
CCGTACGTCG ACGAAGCCGA CTTGGCTGCG CGGGTCGCCG AATACGGCGA GCACGTGGTG 
GTACGCGAAC CGGAACAGGC CCGGAAAGCC GTGGTCGCCC ACCTGCGCGC CGTCGTAGCT 
GCACCCGTCG CGGCCGCGAC AGACGAAGAC CCGCCCGCGC CACTCCCTGG CACGCCGCGT 
CCCCCCGCGT CGCGTCGAGC CGGAACCTCC ACTGAGCAGT TGCGCCGCCT GCTCATGCTG 
GTGCCCTACG CCCTCAGCCA CGACGTGCGG GTCAGCGAGG TCGCCGCCCA CTTCGGACTC 
ACCGAAAAAC AGGTGCTCAA AGACCTGAGC CTGCTGTGGA TGTGCGGGCT ACCCGGCTAC 
ACCCCTGGCG ATCTCATCGA CGTGGACGTG GAGGCTGCCG CCGAAACCGG GGAGATCATC 
ATCTCCAACG CGGACACCCT AGCCGCCCCC CTGCGGCTGA CCGCGGACGA GGCAGCCAGC 
CTCGTCGTCG GGCTGCGCCT GCTCCGTGAC CTGCCCGGCG TGGACAGTGT CGCGCTCGCC 
CGGGTGGAGC AGAAGCTCCG CGACGTGGCG GGCGCTGCCG GCCAGCTCGC CGACGCTGTC 
GACGTGCGCG TGGACGACAA CCCGGAGGTC GCCGAGCTGC GGCACCGCAT CGGCAAAGCC 
TTGGAGTCCG GTAGCCGAGT CCACCTGCGC TACCTGTCCG GCTATGCCGA CCGGGTCAGC 
GAACGCGAAG TCGACCCGAT GCGGCTGGTC GTGCAGGACG GGCACTACTT TTTGGAAGGG 
TGGTGTCGCC TCCGCCGCGA CGTGCGGCTG TTCCGCCTGG ACCGGATTCT CGAACTGGAC 
GTGCTGCCGG TGGCTGCCGA AGTGCCCGCC GGGGTACGCA GCCGCGACCT GAGCAGCGGG 
GTGCTGCAGC GCTCCGCCGA CGATGCTTTT GTCACATTCG AACTGGAGCC TGCGGCGCGC 
TGGGTCACTG AAGAGTACGT CTGCTCCGAG GTGCAGGAAC TGCCCGGAGG ACGGGTGCGC 
GCCACACTGC GCACGCCGGA GCCCGGCTGG GCGGTGCGGC TGGCGCTGCG GCTGGGCGCT 
ACCGGGCGTC TGGTCGCCCC CGGGGAGCTC GCGGCACGGG TCCGGGAGCT GGCTGAACGG 
GCGCTGCAGC GGTATGCGGA GGAAAGACCC GACGTTCCCC AGCGCTGA 

 

Protein sequence

MSQSKTERQL NLVICLLATR RFLSAQEIRA TVHGYGDVES DTAFKRMFER DKKELRDAGI 
PIITGRHDPL SDEDGYRIAR DDYELPPIDL RPDEAAVLGL AARAWRHAVL GEAAANALLK 
LRSVGVPVDA AALPAVTSVL GADEPAFPSV WQAVRDRRPI SFDYRKPGED TPQRRELEPW 
GVANVAGHWY VAGYDRDRRA RRVFRLSRIV GDVQIHTSAP PVQVPKDVDV RSLINARPPE 
PEQVAVLEAR TDAAHALRRA ARRIVAGERT GGTGWDVVEY PYVDEADLAA RVAEYGEHVV 
VREPEQARKA VVAHLRAVVA APVAAATDED PPAPLPGTPR PPASRRAGTS TEQLRRLLML 
VPYALSHDVR VSEVAAHFGL TEKQVLKDLS LLWMCGLPGY TPGDLIDVDV EAAAETGEII 
ISNADTLAAP LRLTADEAAS LVVGLRLLRD LPGVDSVALA RVEQKLRDVA GAAGQLADAV 
DVRVDDNPEV AELRHRIGKA LESGSRVHLR YLSGYADRVS EREVDPMRLV VQDGHYFLEG 
WCRLRRDVRL FRLDRILELD VLPVAAEVPA GVRSRDLSSG VLQRSADDAF VTFELEPAAR 
WVTEEYVCSE VQELPGGRVR ATLRTPEPGW AVRLALRLGA TGRLVAPGEL AARVRELAER 
ALQRYAEERP DVPQR